Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIST3H3Q16695 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIST3H3Q16695 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H3Q16695 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H3Q16695 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H3Q16695 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H3Q16695 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 AL162430.1-201ENST00000480705 870 ntBASIC18.26■□□□□ 0.51
HIST3H3Q16695 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H3Q16695 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H3Q16695 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST3H3Q16695 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST3H3Q16695 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 AC006015.1-201ENST00000429970 570 ntBASIC18.25■□□□□ 0.51
HIST3H3Q16695 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 AC137761.2-201ENST00000561729 223 ntBASIC18.25■□□□□ 0.51
HIST3H3Q16695 AC145350.3-201ENST00000569033 163 ntBASIC18.25■□□□□ 0.51
HIST3H3Q16695 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST3H3Q16695 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST3H3Q16695 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST3H3Q16695 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.24■□□□□ 0.51
HIST3H3Q16695 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 AC007225.1-201ENST00000566331 1836 ntBASIC18.24■□□□□ 0.51
HIST3H3Q16695 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.24■□□□□ 0.51
HIST3H3Q16695 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.24■□□□□ 0.51
HIST3H3Q16695 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST3H3Q16695 AC010536.3-201ENST00000620306 533 ntBASIC18.24■□□□□ 0.51
HIST3H3Q16695 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST3H3Q16695 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HIST3H3Q16695 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HIST3H3Q16695 AC027702.1-201ENST00000563810 1770 ntBASIC18.24■□□□□ 0.51
HIST3H3Q16695 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HIST3H3Q16695 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST3H3Q16695 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.23■□□□□ 0.51
HIST3H3Q16695 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.23■□□□□ 0.51
HIST3H3Q16695 TERF1P5-201ENST00000477545 1207 ntBASIC18.23■□□□□ 0.51
HIST3H3Q16695 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HIST3H3Q16695 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST3H3Q16695 FEM1AP1-201ENST00000431297 1995 ntBASIC18.22■□□□□ 0.51
HIST3H3Q16695 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H3Q16695 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H3Q16695 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms