Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EFNB3Q15768 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.66■□□□□ 0.42
EFNB3Q15768 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
EFNB3Q15768 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
EFNB3Q15768 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNB3Q15768 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.65■□□□□ 0.42
EFNB3Q15768 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EFNB3Q15768 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EFNB3Q15768 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.65■□□□□ 0.42
EFNB3Q15768 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
EFNB3Q15768 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EFNB3Q15768 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.65■□□□□ 0.42
EFNB3Q15768 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
EFNB3Q15768 AC097658.1-201ENST00000475555 843 ntBASIC17.65■□□□□ 0.42
EFNB3Q15768 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.65■□□□□ 0.42
EFNB3Q15768 CYP2T3P-201ENST00000601990 817 ntBASIC17.65■□□□□ 0.42
EFNB3Q15768 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EFNB3Q15768 AC116050.2-201ENST00000612102 1779 ntBASIC17.65■□□□□ 0.42
EFNB3Q15768 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
EFNB3Q15768 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EFNB3Q15768 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.65■□□□□ 0.42
EFNB3Q15768 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
EFNB3Q15768 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
EFNB3Q15768 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
EFNB3Q15768 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNB3Q15768 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.64■□□□□ 0.41
EFNB3Q15768 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNB3Q15768 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNB3Q15768 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EFNB3Q15768 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
EFNB3Q15768 LSM12P1-201ENST00000411836 588 ntBASIC17.64■□□□□ 0.41
EFNB3Q15768 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
EFNB3Q15768 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.64■□□□□ 0.41
EFNB3Q15768 AC091874.3-201ENST00000512672 1195 ntBASIC17.64■□□□□ 0.41
EFNB3Q15768 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.64■□□□□ 0.41
EFNB3Q15768 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNB3Q15768 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
EFNB3Q15768 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNB3Q15768 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EFNB3Q15768 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
EFNB3Q15768 AC244015.2-201ENST00000616358 1861 ntBASIC17.63■□□□□ 0.41
EFNB3Q15768 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 ABHD17AP1-201ENST00000358206 933 ntBASIC17.63■□□□□ 0.41
EFNB3Q15768 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
EFNB3Q15768 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.63■□□□□ 0.41
EFNB3Q15768 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.63■□□□□ 0.41
EFNB3Q15768 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.63■□□□□ 0.41
EFNB3Q15768 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
EFNB3Q15768 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EFNB3Q15768 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNB3Q15768 AC007375.3-201ENST00000600936 2314 ntBASIC17.63■□□□□ 0.41
EFNB3Q15768 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
EFNB3Q15768 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EFNB3Q15768 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNB3Q15768 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.62■□□□□ 0.41
EFNB3Q15768 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.62■□□□□ 0.41
EFNB3Q15768 DUSP5P2-201ENST00000426873 1033 ntBASIC17.62■□□□□ 0.41
EFNB3Q15768 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.62■□□□□ 0.41
EFNB3Q15768 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EFNB3Q15768 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.62■□□□□ 0.41
EFNB3Q15768 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.62■□□□□ 0.41
EFNB3Q15768 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
EFNB3Q15768 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.62■□□□□ 0.41
EFNB3Q15768 AL589743.5-201ENST00000616611 1050 ntBASIC17.62■□□□□ 0.41
EFNB3Q15768 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
EFNB3Q15768 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNB3Q15768 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNB3Q15768 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.62■□□□□ 0.41
EFNB3Q15768 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.61■□□□□ 0.41
EFNB3Q15768 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.61■□□□□ 0.41
EFNB3Q15768 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EFNB3Q15768 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.61■□□□□ 0.41
EFNB3Q15768 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.61■□□□□ 0.41
EFNB3Q15768 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.61■□□□□ 0.41
EFNB3Q15768 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.61■□□□□ 0.41
EFNB3Q15768 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNB3Q15768 AC083880.1-201ENST00000608266 535 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms