Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRKCDQ05655 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19■□□□□ 0.63
PRKCDQ05655 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19■□□□□ 0.63
PRKCDQ05655 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PRKCDQ05655 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PRKCDQ05655 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19■□□□□ 0.63
PRKCDQ05655 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19■□□□□ 0.63
PRKCDQ05655 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19■□□□□ 0.63
PRKCDQ05655 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19■□□□□ 0.63
PRKCDQ05655 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PRKCDQ05655 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PRKCDQ05655 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 PLK5-205ENST00000642079 1969 ntBASIC19■□□□□ 0.63
PRKCDQ05655 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19■□□□□ 0.63
PRKCDQ05655 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19■□□□□ 0.63
PRKCDQ05655 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRKCDQ05655 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCDQ05655 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCDQ05655 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.99■□□□□ 0.63
PRKCDQ05655 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.99■□□□□ 0.63
PRKCDQ05655 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCDQ05655 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
PRKCDQ05655 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCDQ05655 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.99■□□□□ 0.63
PRKCDQ05655 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.99■□□□□ 0.63
PRKCDQ05655 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
PRKCDQ05655 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.99■□□□□ 0.63
PRKCDQ05655 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCDQ05655 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCDQ05655 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.99■□□□□ 0.63
PRKCDQ05655 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCDQ05655 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.99■□□□□ 0.63
PRKCDQ05655 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRKCDQ05655 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRKCDQ05655 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.99■□□□□ 0.63
PRKCDQ05655 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCDQ05655 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCDQ05655 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCDQ05655 MIR939-201ENST00000401314 82 ntBASIC18.98■□□□□ 0.63
PRKCDQ05655 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.98■□□□□ 0.63
PRKCDQ05655 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.98■□□□□ 0.63
PRKCDQ05655 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.98■□□□□ 0.63
PRKCDQ05655 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCDQ05655 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PRKCDQ05655 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCDQ05655 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.98■□□□□ 0.63
PRKCDQ05655 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCDQ05655 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PRKCDQ05655 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKCDQ05655 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKCDQ05655 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKCDQ05655 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCDQ05655 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKCDQ05655 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCDQ05655 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKCDQ05655 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKCDQ05655 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.97■□□□□ 0.63
PRKCDQ05655 AC110285.6-201ENST00000617652 491 ntBASIC18.97■□□□□ 0.63
PRKCDQ05655 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCDQ05655 AL020996.1-203ENST00000536896 2307 ntBASIC18.97■□□□□ 0.63
PRKCDQ05655 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKCDQ05655 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCDQ05655 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKCDQ05655 AC121338.2-201ENST00000622535 1744 ntBASIC18.97■□□□□ 0.63
PRKCDQ05655 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCDQ05655 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.97■□□□□ 0.63
PRKCDQ05655 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.97■□□□□ 0.63
PRKCDQ05655 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCDQ05655 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCDQ05655 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCDQ05655 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.96■□□□□ 0.63
PRKCDQ05655 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PRKCDQ05655 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.96■□□□□ 0.63
PRKCDQ05655 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCDQ05655 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRKCDQ05655 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCDQ05655 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.96■□□□□ 0.63
PRKCDQ05655 AC091305.1-201ENST00000479476 895 ntBASIC18.96■□□□□ 0.63
PRKCDQ05655 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.96■□□□□ 0.63
PRKCDQ05655 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.96■□□□□ 0.63
PRKCDQ05655 AF213884.3-201ENST00000563833 479 ntBASIC18.96■□□□□ 0.63
PRKCDQ05655 AL136967.2-201ENST00000623968 743 ntBASIC18.96■□□□□ 0.63
PRKCDQ05655 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCDQ05655 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRKCDQ05655 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCDQ05655 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCDQ05655 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.96■□□□□ 0.63
PRKCDQ05655 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.96■□□□□ 0.63
PRKCDQ05655 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms