Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL1Q00532 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL1Q00532 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKL1Q00532 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.29■□□□□ 0.84
CDKL1Q00532 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL1Q00532 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL1Q00532 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.29■□□□□ 0.84
CDKL1Q00532 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDKL1Q00532 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CDKL1Q00532 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL1Q00532 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CDKL1Q00532 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL1Q00532 KRT18P20-201ENST00000548986 1279 ntBASIC20.29■□□□□ 0.84
CDKL1Q00532 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.29■□□□□ 0.84
CDKL1Q00532 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDKL1Q00532 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.29■□□□□ 0.84
CDKL1Q00532 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL1Q00532 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CDKL1Q00532 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKL1Q00532 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.28■□□□□ 0.84
CDKL1Q00532 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.28■□□□□ 0.84
CDKL1Q00532 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.28■□□□□ 0.84
CDKL1Q00532 AP001160.3-201ENST00000601484 763 ntBASIC20.28■□□□□ 0.84
CDKL1Q00532 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKL1Q00532 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL1Q00532 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL1Q00532 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL1Q00532 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.27■□□□□ 0.84
CDKL1Q00532 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL1Q00532 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL1Q00532 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKL1Q00532 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL1Q00532 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL1Q00532 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKL1Q00532 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL1Q00532 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.27■□□□□ 0.84
CDKL1Q00532 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDKL1Q00532 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL1Q00532 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CDKL1Q00532 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL1Q00532 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CDKL1Q00532 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CDKL1Q00532 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL1Q00532 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDKL1Q00532 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL1Q00532 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL1Q00532 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL1Q00532 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL1Q00532 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL1Q00532 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL1Q00532 AC004854.2-201ENST00000608450 1441 ntBASIC20.26■□□□□ 0.83
CDKL1Q00532 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDKL1Q00532 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.26■□□□□ 0.83
CDKL1Q00532 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL1Q00532 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.26■□□□□ 0.83
CDKL1Q00532 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL1Q00532 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDKL1Q00532 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 AC121338.2-201ENST00000622535 1744 ntBASIC20.25■□□□□ 0.83
CDKL1Q00532 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL1Q00532 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDKL1Q00532 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
CDKL1Q00532 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.25■□□□□ 0.83
CDKL1Q00532 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL1Q00532 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.25■□□□□ 0.83
CDKL1Q00532 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDKL1Q00532 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 AC006128.1-201ENST00000624704 1661 ntBASIC20.25■□□□□ 0.83
CDKL1Q00532 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL1Q00532 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL1Q00532 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL1Q00532 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL1Q00532 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL1Q00532 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms