Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NKX6-1P78426 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NKX6-1P78426 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NKX6-1P78426 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.15■□□□□ 0.5
NKX6-1P78426 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NKX6-1P78426 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.15■□□□□ 0.5
NKX6-1P78426 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NKX6-1P78426 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
NKX6-1P78426 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.15■□□□□ 0.5
NKX6-1P78426 AP006294.2-201ENST00000641667 209 ntBASIC18.15■□□□□ 0.5
NKX6-1P78426 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX6-1P78426 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NKX6-1P78426 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
NKX6-1P78426 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
NKX6-1P78426 C11orf96-202ENST00000528572 1834 ntBASIC18.14■□□□□ 0.5
NKX6-1P78426 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.14■□□□□ 0.49
NKX6-1P78426 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NKX6-1P78426 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX6-1P78426 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX6-1P78426 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX6-1P78426 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX6-1P78426 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.13■□□□□ 0.49
NKX6-1P78426 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NKX6-1P78426 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX6-1P78426 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 PRORSD1P-201ENST00000295112 541 ntBASIC18.13■□□□□ 0.49
NKX6-1P78426 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
NKX6-1P78426 MIPEPP3-201ENST00000412105 444 ntBASIC18.13■□□□□ 0.49
NKX6-1P78426 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX6-1P78426 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.13■□□□□ 0.49
NKX6-1P78426 AC013268.1-206ENST00000638368 961 ntBASIC18.13■□□□□ 0.49
NKX6-1P78426 AC112229.1-201ENST00000639295 961 ntBASIC18.13■□□□□ 0.49
NKX6-1P78426 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NKX6-1P78426 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX6-1P78426 MKRN4P-201ENST00000444706 1521 ntBASIC18.13■□□□□ 0.49
NKX6-1P78426 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX6-1P78426 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NKX6-1P78426 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.12■□□□□ 0.49
NKX6-1P78426 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.12■□□□□ 0.49
NKX6-1P78426 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.12■□□□□ 0.49
NKX6-1P78426 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX6-1P78426 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.12■□□□□ 0.49
NKX6-1P78426 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX6-1P78426 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NKX6-1P78426 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NKX6-1P78426 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX6-1P78426 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX6-1P78426 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX6-1P78426 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX6-1P78426 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NKX6-1P78426 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX6-1P78426 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX6-1P78426 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 AC120498.10-201ENST00000621827 505 ntBASIC18.11■□□□□ 0.49
NKX6-1P78426 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NKX6-1P78426 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX6-1P78426 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 KRT16P2-201ENST00000414673 1423 ntBASIC18.11■□□□□ 0.49
NKX6-1P78426 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX6-1P78426 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NKX6-1P78426 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms