Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
AP1S1P61966 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
AP1S1P61966 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S1P61966 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S1P61966 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S1P61966 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.86■□□□□ 0.93
AP1S1P61966 AF106564.1-201ENST00000607058 2553 ntBASIC20.86■□□□□ 0.93
AP1S1P61966 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S1P61966 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.86■□□□□ 0.93
AP1S1P61966 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.86■□□□□ 0.93
AP1S1P61966 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S1P61966 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.86■□□□□ 0.93
AP1S1P61966 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S1P61966 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP1S1P61966 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP1S1P61966 NCF1B-203ENST00000435988 1254 ntBASIC20.85■□□□□ 0.93
AP1S1P61966 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.85■□□□□ 0.93
AP1S1P61966 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.85■□□□□ 0.93
AP1S1P61966 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP1S1P61966 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.85■□□□□ 0.93
AP1S1P61966 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
AP1S1P61966 PKD1P6-201ENST00000343738 4769 ntBASIC20.85■□□□□ 0.93
AP1S1P61966 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP1S1P61966 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.85■□□□□ 0.93
AP1S1P61966 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP1S1P61966 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.85■□□□□ 0.93
AP1S1P61966 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
AP1S1P61966 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
AP1S1P61966 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.84■□□□□ 0.93
AP1S1P61966 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
AP1S1P61966 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.84■□□□□ 0.93
AP1S1P61966 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
AP1S1P61966 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP1S1P61966 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP1S1P61966 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP1S1P61966 AF201337.1-201ENST00000520239 748 ntBASIC20.84■□□□□ 0.93
AP1S1P61966 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
AP1S1P61966 AL121832.2-201ENST00000610979 668 ntBASIC20.84■□□□□ 0.93
AP1S1P61966 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.84■□□□□ 0.93
AP1S1P61966 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.84■□□□□ 0.93
AP1S1P61966 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP1S1P61966 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.84■□□□□ 0.93
AP1S1P61966 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
AP1S1P61966 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
AP1S1P61966 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP1S1P61966 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP1S1P61966 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP1S1P61966 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
AP1S1P61966 AL512625.2-201ENST00000417533 625 ntBASIC20.83■□□□□ 0.93
AP1S1P61966 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.83■□□□□ 0.93
AP1S1P61966 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP1S1P61966 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.83■□□□□ 0.93
AP1S1P61966 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
AP1S1P61966 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.83■□□□□ 0.93
AP1S1P61966 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.83■□□□□ 0.93
AP1S1P61966 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
AP1S1P61966 AC121338.2-201ENST00000622535 1744 ntBASIC20.83■□□□□ 0.92
AP1S1P61966 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP1S1P61966 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
AP1S1P61966 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.83■□□□□ 0.92
AP1S1P61966 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
AP1S1P61966 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.83■□□□□ 0.92
AP1S1P61966 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP1S1P61966 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP1S1P61966 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP1S1P61966 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP1S1P61966 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
AP1S1P61966 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP1S1P61966 GPX1P1-201ENST00000388829 606 ntBASIC20.82■□□□□ 0.92
AP1S1P61966 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
AP1S1P61966 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.82■□□□□ 0.92
AP1S1P61966 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
AP1S1P61966 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP1S1P61966 AC007375.3-201ENST00000600936 2314 ntBASIC20.82■□□□□ 0.92
AP1S1P61966 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
AP1S1P61966 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
AP1S1P61966 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP1S1P61966 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.81■□□□□ 0.92
AP1S1P61966 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP1S1P61966 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP1S1P61966 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.81■□□□□ 0.92
AP1S1P61966 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP1S1P61966 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.81■□□□□ 0.92
AP1S1P61966 AC083906.2-201ENST00000511578 360 ntBASIC20.81■□□□□ 0.92
AP1S1P61966 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.81■□□□□ 0.92
AP1S1P61966 AC105036.2-201ENST00000569468 176 ntBASIC20.81■□□□□ 0.92
AP1S1P61966 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.81■□□□□ 0.92
AP1S1P61966 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.81■□□□□ 0.92
AP1S1P61966 AC100791.3-201ENST00000617619 330 ntBASIC20.81■□□□□ 0.92
AP1S1P61966 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP1S1P61966 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.81■□□□□ 0.92
AP1S1P61966 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP1S1P61966 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP1S1P61966 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP1S1P61966 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP1S1P61966 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
AP1S1P61966 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms