Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.18■□□□□ 0.5
UBE2NP61088 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBE2NP61088 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBE2NP61088 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBE2NP61088 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2NP61088 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
UBE2NP61088 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 MIR663A-201ENST00000385250 93 ntBASIC18.17■□□□□ 0.5
UBE2NP61088 CDV3P1-201ENST00000471403 739 ntBASIC18.17■□□□□ 0.5
UBE2NP61088 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
UBE2NP61088 AL591742.1-201ENST00000604433 565 ntBASIC18.17■□□□□ 0.5
UBE2NP61088 AC008694.1-202ENST00000636953 945 ntBASIC18.17■□□□□ 0.5
UBE2NP61088 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
UBE2NP61088 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
UBE2NP61088 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2NP61088 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2NP61088 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.17■□□□□ 0.5
UBE2NP61088 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBE2NP61088 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2NP61088 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBE2NP61088 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2NP61088 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
UBE2NP61088 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.16■□□□□ 0.5
UBE2NP61088 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2NP61088 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2NP61088 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.16■□□□□ 0.5
UBE2NP61088 CNN2P6-201ENST00000439038 900 ntBASIC18.16■□□□□ 0.5
UBE2NP61088 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2NP61088 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2NP61088 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2NP61088 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2NP61088 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2NP61088 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.16■□□□□ 0.5
UBE2NP61088 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBE2NP61088 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2NP61088 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2NP61088 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.15■□□□□ 0.5
UBE2NP61088 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2NP61088 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2NP61088 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2NP61088 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2NP61088 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
UBE2NP61088 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.15■□□□□ 0.5
UBE2NP61088 AC069236.1-201ENST00000604339 616 ntBASIC18.15■□□□□ 0.5
UBE2NP61088 RAP2CP1-201ENST00000605103 478 ntBASIC18.15■□□□□ 0.5
UBE2NP61088 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2NP61088 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
UBE2NP61088 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2NP61088 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2NP61088 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.15■□□□□ 0.5
UBE2NP61088 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2NP61088 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2NP61088 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2NP61088 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2NP61088 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2NP61088 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2NP61088 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.5
UBE2NP61088 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2NP61088 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.14■□□□□ 0.49
UBE2NP61088 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.14■□□□□ 0.49
UBE2NP61088 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE2NP61088 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
UBE2NP61088 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2NP61088 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE2NP61088 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
UBE2NP61088 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.13■□□□□ 0.49
UBE2NP61088 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
UBE2NP61088 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBE2NP61088 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.13■□□□□ 0.49
UBE2NP61088 CROCCP5-201ENST00000436658 830 ntBASIC18.13■□□□□ 0.49
UBE2NP61088 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.13■□□□□ 0.49
UBE2NP61088 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE2NP61088 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms