Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
VSX2P58304 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VSX2P58304 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VSX2P58304 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
VSX2P58304 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.8■□□□□ 0.76
VSX2P58304 AF201337.1-201ENST00000520239 748 ntBASIC19.8■□□□□ 0.76
VSX2P58304 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX2P58304 AC069236.1-201ENST00000604339 616 ntBASIC19.8■□□□□ 0.76
VSX2P58304 AC016405.3-201ENST00000607710 860 ntBASIC19.8■□□□□ 0.76
VSX2P58304 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
VSX2P58304 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX2P58304 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VSX2P58304 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX2P58304 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX2P58304 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VSX2P58304 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.8■□□□□ 0.76
VSX2P58304 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX2P58304 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.79■□□□□ 0.76
VSX2P58304 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX2P58304 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX2P58304 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VSX2P58304 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
VSX2P58304 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX2P58304 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX2P58304 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.79■□□□□ 0.76
VSX2P58304 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.79■□□□□ 0.76
VSX2P58304 AC133552.2-202ENST00000575694 574 ntBASIC19.79■□□□□ 0.76
VSX2P58304 AC104771.1-201ENST00000603335 964 ntBASIC19.79■□□□□ 0.76
VSX2P58304 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.79■□□□□ 0.76
VSX2P58304 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VSX2P58304 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX2P58304 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.79■□□□□ 0.76
VSX2P58304 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
VSX2P58304 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VSX2P58304 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.79■□□□□ 0.76
VSX2P58304 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
VSX2P58304 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VSX2P58304 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.78■□□□□ 0.76
VSX2P58304 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VSX2P58304 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.78■□□□□ 0.76
VSX2P58304 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VSX2P58304 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VSX2P58304 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VSX2P58304 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VSX2P58304 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VSX2P58304 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.78■□□□□ 0.76
VSX2P58304 CDV3P1-201ENST00000471403 739 ntBASIC19.78■□□□□ 0.76
VSX2P58304 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.78■□□□□ 0.76
VSX2P58304 AL162412.1-201ENST00000567129 965 ntBASIC19.78■□□□□ 0.76
VSX2P58304 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.78■□□□□ 0.76
VSX2P58304 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
VSX2P58304 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VSX2P58304 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VSX2P58304 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VSX2P58304 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VSX2P58304 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
VSX2P58304 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
VSX2P58304 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.77■□□□□ 0.76
VSX2P58304 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VSX2P58304 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.77■□□□□ 0.76
VSX2P58304 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VSX2P58304 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VSX2P58304 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VSX2P58304 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.77■□□□□ 0.76
VSX2P58304 OR10C1-204ENST00000622521 1039 ntBASIC19.77■□□□□ 0.76
VSX2P58304 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VSX2P58304 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VSX2P58304 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VSX2P58304 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
VSX2P58304 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 AC093787.1-201ENST00000450396 207 ntBASIC19.76■□□□□ 0.75
VSX2P58304 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.76■□□□□ 0.75
VSX2P58304 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
VSX2P58304 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX2P58304 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.76■□□□□ 0.75
VSX2P58304 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VSX2P58304 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.75■□□□□ 0.75
VSX2P58304 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VSX2P58304 SLC29A4P1-201ENST00000398760 971 ntBASIC19.75■□□□□ 0.75
VSX2P58304 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VSX2P58304 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.75■□□□□ 0.75
VSX2P58304 RARRES2P4-201ENST00000514074 484 ntBASIC19.75■□□□□ 0.75
VSX2P58304 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.75■□□□□ 0.75
VSX2P58304 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
VSX2P58304 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VSX2P58304 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VSX2P58304 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VSX2P58304 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.75■□□□□ 0.75
VSX2P58304 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VSX2P58304 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.75■□□□□ 0.75
VSX2P58304 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.75■□□□□ 0.75
VSX2P58304 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms