Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
FOXG1P55316 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXG1P55316 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXG1P55316 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.17■□□□□ 0.5
FOXG1P55316 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXG1P55316 TSPY6P-201ENST00000448518 926 ntBASIC18.17■□□□□ 0.5
FOXG1P55316 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXG1P55316 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
FOXG1P55316 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.17■□□□□ 0.5
FOXG1P55316 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXG1P55316 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXG1P55316 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXG1P55316 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
FOXG1P55316 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FOXG1P55316 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXG1P55316 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 AC007322.3-201ENST00000426526 701 ntBASIC18.16■□□□□ 0.5
FOXG1P55316 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXG1P55316 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXG1P55316 AC069236.1-201ENST00000604339 616 ntBASIC18.16■□□□□ 0.5
FOXG1P55316 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXG1P55316 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXG1P55316 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 AC116050.2-201ENST00000612102 1779 ntBASIC18.16■□□□□ 0.5
FOXG1P55316 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXG1P55316 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXG1P55316 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FOXG1P55316 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FOXG1P55316 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FOXG1P55316 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FOXG1P55316 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXG1P55316 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXG1P55316 AL162412.1-201ENST00000567129 965 ntBASIC18.15■□□□□ 0.5
FOXG1P55316 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXG1P55316 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXG1P55316 OR10C1-204ENST00000622521 1039 ntBASIC18.15■□□□□ 0.5
FOXG1P55316 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXG1P55316 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
FOXG1P55316 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXG1P55316 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXG1P55316 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FOXG1P55316 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXG1P55316 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXG1P55316 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
FOXG1P55316 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FOXG1P55316 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
FOXG1P55316 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FOXG1P55316 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXG1P55316 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXG1P55316 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
FOXG1P55316 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 AL355472.2-201ENST00000422958 438 ntBASIC18.14■□□□□ 0.49
FOXG1P55316 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.14■□□□□ 0.49
FOXG1P55316 CDV3P1-201ENST00000471403 739 ntBASIC18.14■□□□□ 0.49
FOXG1P55316 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXG1P55316 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.14■□□□□ 0.49
FOXG1P55316 AL138781.1-201ENST00000566567 1274 ntBASIC18.14■□□□□ 0.49
FOXG1P55316 AC008694.1-202ENST00000636953 945 ntBASIC18.14■□□□□ 0.49
FOXG1P55316 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
FOXG1P55316 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXG1P55316 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXG1P55316 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
FOXG1P55316 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXG1P55316 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXG1P55316 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXG1P55316 AL355802.2-201ENST00000402069 882 ntBASIC18.13■□□□□ 0.49
FOXG1P55316 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXG1P55316 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXG1P55316 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXG1P55316 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.13■□□□□ 0.49
FOXG1P55316 FAM21FP-204ENST00000608637 956 ntBASIC18.13■□□□□ 0.49
FOXG1P55316 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
FOXG1P55316 AC010980.2-201ENST00000587099 1412 ntBASIC18.13■□□□□ 0.49
FOXG1P55316 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXG1P55316 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
FOXG1P55316 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms