Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH4P55283 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH4P55283 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 MKRN4P-201ENST00000444706 1521 ntBASIC21.19■□□□□ 0.98
CDH4P55283 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.19■□□□□ 0.98
CDH4P55283 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CDH4P55283 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CDH4P55283 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.19■□□□□ 0.98
CDH4P55283 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH4P55283 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CDH4P55283 AC100791.3-201ENST00000617619 330 ntBASIC21.19■□□□□ 0.98
CDH4P55283 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 AC010980.2-201ENST00000587099 1412 ntBASIC21.19■□□□□ 0.98
CDH4P55283 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDH4P55283 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH4P55283 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH4P55283 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH4P55283 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CDH4P55283 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH4P55283 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH4P55283 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH4P55283 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH4P55283 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CDH4P55283 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH4P55283 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH4P55283 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH4P55283 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH4P55283 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH4P55283 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH4P55283 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH4P55283 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH4P55283 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH4P55283 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH4P55283 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH4P55283 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH4P55283 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH4P55283 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH4P55283 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH4P55283 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDH4P55283 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH4P55283 AC011484.1-201ENST00000377652 1995 ntBASIC21.17■□□□□ 0.98
CDH4P55283 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH4P55283 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH4P55283 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CDH4P55283 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH4P55283 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH4P55283 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH4P55283 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH4P55283 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH4P55283 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH4P55283 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH4P55283 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH4P55283 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.16■□□□□ 0.98
CDH4P55283 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH4P55283 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH4P55283 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH4P55283 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH4P55283 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH4P55283 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH4P55283 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CDH4P55283 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CDH4P55283 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CDH4P55283 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.15■□□□□ 0.98
CDH4P55283 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.15■□□□□ 0.98
CDH4P55283 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH4P55283 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CDH4P55283 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CDH4P55283 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH4P55283 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.15■□□□□ 0.98
CDH4P55283 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CDH4P55283 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH4P55283 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH4P55283 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH4P55283 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH4P55283 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.14■□□□□ 0.98
CDH4P55283 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH4P55283 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDH4P55283 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CDH4P55283 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH4P55283 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH4P55283 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.14■□□□□ 0.97
CDH4P55283 AC142086.2-201ENST00000569753 217 ntBASIC21.14■□□□□ 0.97
CDH4P55283 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms