Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PSMD4P55036 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.22■□□□□ 0.67
PSMD4P55036 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PSMD4P55036 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.21■□□□□ 0.67
PSMD4P55036 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.21■□□□□ 0.67
PSMD4P55036 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.21■□□□□ 0.67
PSMD4P55036 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.21■□□□□ 0.67
PSMD4P55036 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PSMD4P55036 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
PSMD4P55036 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.21■□□□□ 0.67
PSMD4P55036 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PSMD4P55036 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PSMD4P55036 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PSMD4P55036 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
PSMD4P55036 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PSMD4P55036 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PSMD4P55036 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PSMD4P55036 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PSMD4P55036 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.2■□□□□ 0.66
PSMD4P55036 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.2■□□□□ 0.66
PSMD4P55036 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.2■□□□□ 0.66
PSMD4P55036 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.2■□□□□ 0.66
PSMD4P55036 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PSMD4P55036 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.2■□□□□ 0.66
PSMD4P55036 UBE2DNL-204ENST00000602536 740 ntBASIC19.2■□□□□ 0.66
PSMD4P55036 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.2■□□□□ 0.66
PSMD4P55036 MYCNOS-205ENST00000641950 531 ntBASIC19.2■□□□□ 0.66
PSMD4P55036 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PSMD4P55036 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.2■□□□□ 0.66
PSMD4P55036 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PSMD4P55036 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PSMD4P55036 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PSMD4P55036 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PSMD4P55036 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.19■□□□□ 0.66
PSMD4P55036 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.19■□□□□ 0.66
PSMD4P55036 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PSMD4P55036 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
PSMD4P55036 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PSMD4P55036 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PSMD4P55036 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.19■□□□□ 0.66
PSMD4P55036 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.19■□□□□ 0.66
PSMD4P55036 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PSMD4P55036 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.19■□□□□ 0.66
PSMD4P55036 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PSMD4P55036 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.19■□□□□ 0.66
PSMD4P55036 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PSMD4P55036 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.19■□□□□ 0.66
PSMD4P55036 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
PSMD4P55036 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PSMD4P55036 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSMD4P55036 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSMD4P55036 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PSMD4P55036 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.18■□□□□ 0.66
PSMD4P55036 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.18■□□□□ 0.66
PSMD4P55036 AC243732.1-201ENST00000612648 864 ntBASIC19.18■□□□□ 0.66
PSMD4P55036 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.18■□□□□ 0.66
PSMD4P55036 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSMD4P55036 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSMD4P55036 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSMD4P55036 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PSMD4P55036 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PSMD4P55036 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.18■□□□□ 0.66
PSMD4P55036 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PSMD4P55036 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PSMD4P55036 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PSMD4P55036 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.17■□□□□ 0.66
PSMD4P55036 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.17■□□□□ 0.66
PSMD4P55036 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.17■□□□□ 0.66
PSMD4P55036 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.17■□□□□ 0.66
PSMD4P55036 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.17■□□□□ 0.66
PSMD4P55036 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PSMD4P55036 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.17■□□□□ 0.66
PSMD4P55036 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PSMD4P55036 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PSMD4P55036 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PSMD4P55036 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms