Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN1P54253 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN1P54253 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
ATXN1P54253 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.7■■□□□ 1.07
ATXN1P54253 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
ATXN1P54253 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ATXN1P54253 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.7■■□□□ 1.06
ATXN1P54253 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ATXN1P54253 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.7■■□□□ 1.06
ATXN1P54253 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 RPS2P52-201ENST00000469610 820 ntBASIC21.7■■□□□ 1.06
ATXN1P54253 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.7■■□□□ 1.06
ATXN1P54253 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.7■■□□□ 1.06
ATXN1P54253 AC120498.10-201ENST00000621827 505 ntBASIC21.7■■□□□ 1.06
ATXN1P54253 AP006294.2-201ENST00000641667 209 ntBASIC21.7■■□□□ 1.06
ATXN1P54253 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
ATXN1P54253 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.7■■□□□ 1.06
ATXN1P54253 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.7■■□□□ 1.06
ATXN1P54253 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ATXN1P54253 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN1P54253 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN1P54253 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN1P54253 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ATXN1P54253 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN1P54253 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN1P54253 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN1P54253 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.69■■□□□ 1.06
ATXN1P54253 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN1P54253 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.69■■□□□ 1.06
ATXN1P54253 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.69■■□□□ 1.06
ATXN1P54253 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN1P54253 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ATXN1P54253 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.69■■□□□ 1.06
ATXN1P54253 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.69■■□□□ 1.06
ATXN1P54253 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.69■■□□□ 1.06
ATXN1P54253 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.69■■□□□ 1.06
ATXN1P54253 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ATXN1P54253 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.69■■□□□ 1.06
ATXN1P54253 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN1P54253 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.68■■□□□ 1.06
ATXN1P54253 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATXN1P54253 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.68■■□□□ 1.06
ATXN1P54253 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATXN1P54253 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.68■■□□□ 1.06
ATXN1P54253 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATXN1P54253 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.68■■□□□ 1.06
ATXN1P54253 MFSD11-216ENST00000590393 1141 ntBASIC21.68■■□□□ 1.06
ATXN1P54253 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATXN1P54253 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.68■■□□□ 1.06
ATXN1P54253 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.68■■□□□ 1.06
ATXN1P54253 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATXN1P54253 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ATXN1P54253 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATXN1P54253 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
ATXN1P54253 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATXN1P54253 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATXN1P54253 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.67■■□□□ 1.06
ATXN1P54253 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.67■■□□□ 1.06
ATXN1P54253 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.67■■□□□ 1.06
ATXN1P54253 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.67■■□□□ 1.06
ATXN1P54253 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATXN1P54253 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.67■■□□□ 1.06
ATXN1P54253 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATXN1P54253 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATXN1P54253 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.66■■□□□ 1.06
ATXN1P54253 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.66■■□□□ 1.06
ATXN1P54253 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.66■■□□□ 1.06
ATXN1P54253 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.66■■□□□ 1.06
ATXN1P54253 SLC7A5P1-201ENST00000568957 537 ntBASIC21.66■■□□□ 1.06
ATXN1P54253 AC231657.2-201ENST00000624556 255 ntBASIC21.66■■□□□ 1.06
ATXN1P54253 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ATXN1P54253 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATXN1P54253 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATXN1P54253 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATXN1P54253 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms