Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.48■□□□□ 0.87
CLNS1AP54105 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLNS1AP54105 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.48■□□□□ 0.87
CLNS1AP54105 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 SMG8-203ENST00000578922 2178 ntBASIC20.48■□□□□ 0.87
CLNS1AP54105 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLNS1AP54105 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
CLNS1AP54105 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.47■□□□□ 0.87
CLNS1AP54105 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.47■□□□□ 0.87
CLNS1AP54105 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLNS1AP54105 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLNS1AP54105 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.46■□□□□ 0.87
CLNS1AP54105 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 GUSBP5-201ENST00000418136 578 ntBASIC20.46■□□□□ 0.87
CLNS1AP54105 AC010141.3-201ENST00000456659 717 ntBASIC20.46■□□□□ 0.87
CLNS1AP54105 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.46■□□□□ 0.87
CLNS1AP54105 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.46■□□□□ 0.87
CLNS1AP54105 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.46■□□□□ 0.87
CLNS1AP54105 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.46■□□□□ 0.87
CLNS1AP54105 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.46■□□□□ 0.87
CLNS1AP54105 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLNS1AP54105 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CLNS1AP54105 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLNS1AP54105 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.45■□□□□ 0.86
CLNS1AP54105 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLNS1AP54105 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLNS1AP54105 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CLNS1AP54105 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.45■□□□□ 0.86
CLNS1AP54105 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CLNS1AP54105 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLNS1AP54105 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLNS1AP54105 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLNS1AP54105 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLNS1AP54105 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLNS1AP54105 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLNS1AP54105 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLNS1AP54105 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.45■□□□□ 0.86
CLNS1AP54105 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLNS1AP54105 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLNS1AP54105 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLNS1AP54105 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLNS1AP54105 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLNS1AP54105 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.44■□□□□ 0.86
CLNS1AP54105 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.44■□□□□ 0.86
CLNS1AP54105 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLNS1AP54105 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.44■□□□□ 0.86
CLNS1AP54105 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.44■□□□□ 0.86
CLNS1AP54105 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLNS1AP54105 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLNS1AP54105 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.44■□□□□ 0.86
CLNS1AP54105 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.44■□□□□ 0.86
CLNS1AP54105 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CLNS1AP54105 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLNS1AP54105 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.44■□□□□ 0.86
CLNS1AP54105 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLNS1AP54105 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLNS1AP54105 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.43■□□□□ 0.86
CLNS1AP54105 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLNS1AP54105 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CLNS1AP54105 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.43■□□□□ 0.86
CLNS1AP54105 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.43■□□□□ 0.86
CLNS1AP54105 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CLNS1AP54105 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLNS1AP54105 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms