Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ITGA8P53708 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.2■□□□□ 0.98
ITGA8P53708 AC099791.1-201ENST00000416440 715 ntBASIC21.2■□□□□ 0.98
ITGA8P53708 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.2■□□□□ 0.98
ITGA8P53708 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.2■□□□□ 0.98
ITGA8P53708 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ITGA8P53708 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITGA8P53708 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.2■□□□□ 0.98
ITGA8P53708 AC007952.6-201ENST00000573168 2673 ntBASIC21.2■□□□□ 0.98
ITGA8P53708 AC003957.1-201ENST00000625108 2673 ntBASIC21.2■□□□□ 0.98
ITGA8P53708 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.2■□□□□ 0.98
ITGA8P53708 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ITGA8P53708 AC011484.1-201ENST00000377652 1995 ntBASIC21.19■□□□□ 0.98
ITGA8P53708 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ITGA8P53708 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ITGA8P53708 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.19■□□□□ 0.98
ITGA8P53708 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.19■□□□□ 0.98
ITGA8P53708 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.19■□□□□ 0.98
ITGA8P53708 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.19■□□□□ 0.98
ITGA8P53708 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.19■□□□□ 0.98
ITGA8P53708 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ITGA8P53708 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.19■□□□□ 0.98
ITGA8P53708 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.19■□□□□ 0.98
ITGA8P53708 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ITGA8P53708 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ITGA8P53708 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ITGA8P53708 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ITGA8P53708 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.19■□□□□ 0.98
ITGA8P53708 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.19■□□□□ 0.98
ITGA8P53708 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ITGA8P53708 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.18■□□□□ 0.98
ITGA8P53708 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.18■□□□□ 0.98
ITGA8P53708 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ITGA8P53708 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.18■□□□□ 0.98
ITGA8P53708 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.18■□□□□ 0.98
ITGA8P53708 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.18■□□□□ 0.98
ITGA8P53708 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ITGA8P53708 AC061975.6-201ENST00000579045 1553 ntBASIC21.18■□□□□ 0.98
ITGA8P53708 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.18■□□□□ 0.98
ITGA8P53708 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ITGA8P53708 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.18■□□□□ 0.98
ITGA8P53708 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.17■□□□□ 0.98
ITGA8P53708 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGA8P53708 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGA8P53708 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGA8P53708 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGA8P53708 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ITGA8P53708 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.17■□□□□ 0.98
ITGA8P53708 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
ITGA8P53708 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.17■□□□□ 0.98
ITGA8P53708 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.17■□□□□ 0.98
ITGA8P53708 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.17■□□□□ 0.98
ITGA8P53708 EEF1DP3-203ENST00000566025 782 ntBASIC21.17■□□□□ 0.98
ITGA8P53708 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.17■□□□□ 0.98
ITGA8P53708 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.17■□□□□ 0.98
ITGA8P53708 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ITGA8P53708 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ITGA8P53708 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGA8P53708 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ITGA8P53708 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ITGA8P53708 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGA8P53708 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
ITGA8P53708 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
ITGA8P53708 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGA8P53708 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGA8P53708 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGA8P53708 AC099778.1-201ENST00000568593 1911 ntBASIC21.16■□□□□ 0.98
ITGA8P53708 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.16■□□□□ 0.98
ITGA8P53708 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITGA8P53708 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITGA8P53708 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.16■□□□□ 0.98
ITGA8P53708 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.16■□□□□ 0.98
ITGA8P53708 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITGA8P53708 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
ITGA8P53708 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.16■□□□□ 0.98
ITGA8P53708 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.16■□□□□ 0.98
ITGA8P53708 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.16■□□□□ 0.98
ITGA8P53708 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
ITGA8P53708 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.15■□□□□ 0.98
ITGA8P53708 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITGA8P53708 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ITGA8P53708 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITGA8P53708 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITGA8P53708 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms