Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB5CP51148 MIR4281-201ENST00000580852 62 ntBASIC16.63■□□□□ 0.25
RAB5CP51148 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RAB5CP51148 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB5CP51148 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RAB5CP51148 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAB5CP51148 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
RAB5CP51148 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB5CP51148 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RAB5CP51148 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
RAB5CP51148 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB5CP51148 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
RAB5CP51148 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 AC120498.9-201ENST00000339021 3867 ntBASIC16.62■□□□□ 0.25
RAB5CP51148 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB5CP51148 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB5CP51148 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB5CP51148 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5CP51148 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB5CP51148 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.61■□□□□ 0.25
RAB5CP51148 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB5CP51148 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB5CP51148 THA1P-201ENST00000590384 1145 ntBASIC16.61■□□□□ 0.25
RAB5CP51148 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB5CP51148 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB5CP51148 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RAB5CP51148 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAB5CP51148 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB5CP51148 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAB5CP51148 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB5CP51148 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB5CP51148 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB5CP51148 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RAB5CP51148 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB5CP51148 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB5CP51148 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB5CP51148 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB5CP51148 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB5CP51148 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB5CP51148 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB5CP51148 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB5CP51148 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB5CP51148 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
RAB5CP51148 DUX4L9-201ENST00000449051 1259 ntBASIC16.59■□□□□ 0.25
RAB5CP51148 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RAB5CP51148 AC005703.6-201ENST00000623265 1329 ntBASIC16.59■□□□□ 0.25
RAB5CP51148 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB5CP51148 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB5CP51148 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB5CP51148 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB5CP51148 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB5CP51148 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB5CP51148 BCL2-203ENST00000589955 5011 ntBASIC16.58■□□□□ 0.24
RAB5CP51148 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB5CP51148 SNX5-217ENST00000606557 1087 ntBASIC16.58■□□□□ 0.24
RAB5CP51148 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB5CP51148 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB5CP51148 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB5CP51148 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB5CP51148 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms