Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RXRGP48443 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RXRGP48443 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRGP48443 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RXRGP48443 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.65■□□□□ 0.9
RXRGP48443 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRGP48443 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RXRGP48443 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RXRGP48443 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RXRGP48443 AC010980.2-201ENST00000587099 1412 ntBASIC20.64■□□□□ 0.89
RXRGP48443 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRGP48443 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RXRGP48443 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RXRGP48443 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.64■□□□□ 0.89
RXRGP48443 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RXRGP48443 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRGP48443 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RXRGP48443 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.64■□□□□ 0.89
RXRGP48443 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
RXRGP48443 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.64■□□□□ 0.89
RXRGP48443 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.63■□□□□ 0.89
RXRGP48443 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.63■□□□□ 0.89
RXRGP48443 AC091874.3-201ENST00000512672 1195 ntBASIC20.63■□□□□ 0.89
RXRGP48443 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.63■□□□□ 0.89
RXRGP48443 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.63■□□□□ 0.89
RXRGP48443 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RXRGP48443 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.63■□□□□ 0.89
RXRGP48443 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RXRGP48443 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RXRGP48443 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.63■□□□□ 0.89
RXRGP48443 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.63■□□□□ 0.89
RXRGP48443 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRGP48443 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RXRGP48443 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRGP48443 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.61■□□□□ 0.89
RXRGP48443 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 AC061975.6-201ENST00000579045 1553 ntBASIC20.61■□□□□ 0.89
RXRGP48443 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RXRGP48443 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RXRGP48443 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.61■□□□□ 0.89
RXRGP48443 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
RXRGP48443 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RXRGP48443 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
RXRGP48443 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RXRGP48443 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.61■□□□□ 0.89
RXRGP48443 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RXRGP48443 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.6■□□□□ 0.89
RXRGP48443 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 PRORSD1P-201ENST00000295112 541 ntBASIC20.6■□□□□ 0.89
RXRGP48443 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.6■□□□□ 0.89
RXRGP48443 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.6■□□□□ 0.89
RXRGP48443 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.6■□□□□ 0.89
RXRGP48443 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.6■□□□□ 0.89
RXRGP48443 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.6■□□□□ 0.89
RXRGP48443 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 AC092667.1-201ENST00000434301 2586 ntBASIC20.6■□□□□ 0.89
RXRGP48443 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RXRGP48443 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RXRGP48443 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.6■□□□□ 0.89
RXRGP48443 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RXRGP48443 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RXRGP48443 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms