Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YNL228WYNL228W 777 nt1.44□□□□□ -2.18
TY1B-JR1P47098 BAS1YKR099W 2436 nt1.43□□□□□ -2.18
TY1B-JR1P47098 YMR045CYMR045C 5268 nt1.43□□□□□ -2.18
TY1B-JR1P47098 YDL163WYDL163W 303 nt1.43□□□□□ -2.18
TY1B-JR1P47098 VMA22YHR060W 546 nt1.43□□□□□ -2.18
TY1B-JR1P47098 TPK3YKL166C 1197 nt1.43□□□□□ -2.18
TY1B-JR1P47098 YKR075CYKR075C 924 nt1.43□□□□□ -2.18
TY1B-JR1P47098 YVC1YOR087W 2028 nt1.43□□□□□ -2.18
TY1B-JR1P47098 SMC4YLR086W 4257 nt1.43□□□□□ -2.18
TY1B-JR1P47098 NRG1YDR043C 696 nt1.42□□□□□ -2.18
TY1B-JR1P47098 EFG1YGR271C-A 702 nt1.42□□□□□ -2.18
TY1B-JR1P47098 RPL16BYNL069C 597 nt1.42□□□□□ -2.18
TY1B-JR1P47098 PKP2YGL059W 1476 nt1.42□□□□□ -2.18
TY1B-JR1P47098 RNH70YGR276C 1662 nt1.42□□□□□ -2.18
TY1B-JR1P47098 DSS1YMR287C 2910 nt1.42□□□□□ -2.18
TY1B-JR1P47098 SAR1YPL218W 573 nt1.42□□□□□ -2.18
TY1B-JR1P47098 MON2YNL297C 4911 nt1.41□□□□□ -2.18
TY1B-JR1P47098 LSM6YDR378C 261 nt1.41□□□□□ -2.18
TY1B-JR1P47098 BUD19YJL188C 309 nt1.41□□□□□ -2.18
TY1B-JR1P47098 SSP2YOR242C 1116 nt1.41□□□□□ -2.18
TY1B-JR1P47098 YGR011WYGR011W 327 nt1.4□□□□□ -2.19
TY1B-JR1P47098 YBR013CYBR013C 390 nt1.4□□□□□ -2.19
TY1B-JR1P47098 PIG2YIL045W 1617 nt1.4□□□□□ -2.19
TY1B-JR1P47098 ARC18YLR370C 537 nt1.39□□□□□ -2.19
TY1B-JR1P47098 YBR134WYBR134W 402 nt1.39□□□□□ -2.19
TY1B-JR1P47098 ANR2YKL047W 1551 nt1.39□□□□□ -2.19
TY1B-JR1P47098 YBR238CYBR238C 2196 nt1.39□□□□□ -2.19
TY1B-JR1P47098 NHP2YDL208W 471 nt1.39□□□□□ -2.19
TY1B-JR1P47098 YIL020C-AYIL020C-A 339 nt1.39□□□□□ -2.19
TY1B-JR1P47098 YNL109WYNL109W 546 nt1.39□□□□□ -2.19
TY1B-JR1P47098 HRT1YOL133W 366 nt1.39□□□□□ -2.19
TY1B-JR1P47098 YOL159CYOL159C 516 nt1.39□□□□□ -2.19
TY1B-JR1P47098 HCS1YKL017C 2052 nt1.39□□□□□ -2.19
TY1B-JR1P47098 MGA1YGR249W 1371 nt1.39□□□□□ -2.19
TY1B-JR1P47098 POM152YMR129W 4014 nt1.38□□□□□ -2.19
TY1B-JR1P47098 IME1YJR094C 1083 nt1.38□□□□□ -2.19
TY1B-JR1P47098 YLR076CYLR076C 423 nt1.38□□□□□ -2.19
TY1B-JR1P47098 DIA1YMR316W 1011 nt1.38□□□□□ -2.19
TY1B-JR1P47098 PBI1YPL272C 1554 nt1.38□□□□□ -2.19
TY1B-JR1P47098 YDR341CYDR341C 1824 nt1.38□□□□□ -2.19
TY1B-JR1P47098 TSC13YDL015C 933 nt1.37□□□□□ -2.19
TY1B-JR1P47098 HTA2YBL003C 399 nt1.37□□□□□ -2.19
TY1B-JR1P47098 YNL276CYNL276C 396 nt1.37□□□□□ -2.19
TY1B-JR1P47098 AIM14YGL160W 1713 nt1.37□□□□□ -2.19
TY1B-JR1P47098 TFC8YPL007C 1767 nt1.37□□□□□ -2.19
TY1B-JR1P47098 COS12YGL263W 1143 nt1.36□□□□□ -2.19
TY1B-JR1P47098 YHL044WYHL044W 708 nt1.36□□□□□ -2.19
TY1B-JR1P47098 AIM18YHR198C 966 nt1.36□□□□□ -2.19
TY1B-JR1P47098 TIM18YOR297C 579 nt1.36□□□□□ -2.19
TY1B-JR1P47098 TYE7YOR344C 876 nt1.36□□□□□ -2.19
TY1B-JR1P47098 SNF12YNR023W 1701 nt1.36□□□□□ -2.19
TY1B-JR1P47098 FBP26YJL155C 1359 nt1.36□□□□□ -2.19
TY1B-JR1P47098 CGR1YGL029W 363 nt1.36□□□□□ -2.19
TY1B-JR1P47098 MCM22YJR135C 720 nt1.36□□□□□ -2.19
TY1B-JR1P47098 VPS71YML041C 843 nt1.36□□□□□ -2.19
TY1B-JR1P47098 URA10YMR271C 684 nt1.36□□□□□ -2.19
TY1B-JR1P47098 ERP4YOR016C 624 nt1.36□□□□□ -2.19
TY1B-JR1P47098 MSL5YLR116W 1431 nt1.36□□□□□ -2.19
TY1B-JR1P47098 YLR050CYLR050C 486 nt1.35□□□□□ -2.19
TY1B-JR1P47098 UTP8YGR128C 2142 nt1.34□□□□□ -2.19
TY1B-JR1P47098 UTP30YKR060W 825 nt1.34□□□□□ -2.19
TY1B-JR1P47098 RPF2YKR081C 1035 nt1.34□□□□□ -2.19
TY1B-JR1P47098 YOL014WYOL014W 375 nt1.34□□□□□ -2.19
TY1B-JR1P47098 YCL046WYCL046W 324 nt1.34□□□□□ -2.19
TY1B-JR1P47098 RPS29BYDL061C 171 nt1.34□□□□□ -2.2
TY1B-JR1P47098 IRC4YDR540C 540 nt1.34□□□□□ -2.2
TY1B-JR1P47098 YGR039WYGR039W 312 nt1.34□□□□□ -2.2
TY1B-JR1P47098 RPS17AYML024W 411 nt1.34□□□□□ -2.2
TY1B-JR1P47098 TRL1YJL087C 2484 nt1.34□□□□□ -2.2
TY1B-JR1P47098 TRM82YDR165W 1335 nt1.33□□□□□ -2.2
TY1B-JR1P47098 YOR019WYOR019W 2193 nt1.32□□□□□ -2.2
TY1B-JR1P47098 AIM4YBR194W 372 nt1.32□□□□□ -2.2
TY1B-JR1P47098 ARF1YDL192W 546 nt1.31□□□□□ -2.2
TY1B-JR1P47098 YMR320WYMR320W 306 nt1.31□□□□□ -2.2
TY1B-JR1P47098 COS1YNL336W 1146 nt1.31□□□□□ -2.2
TY1B-JR1P47098 YPR146CYPR146C 330 nt1.31□□□□□ -2.2
TY1B-JR1P47098 RKM4YDR257C 1485 nt1.31□□□□□ -2.2
TY1B-JR1P47098 SYO1YDL063C 1863 nt1.31□□□□□ -2.2
TY1B-JR1P47098 RVS161YCR009C 798 nt1.31□□□□□ -2.2
TY1B-JR1P47098 WIP1YDR374W-A 270 nt1.31□□□□□ -2.2
TY1B-JR1P47098 YGR283CYGR283C 1026 nt1.31□□□□□ -2.2
TY1B-JR1P47098 RPL34BYIL052C 366 nt1.31□□□□□ -2.2
TY1B-JR1P47098 RDN58-1RDN58-1 158 nt1.31□□□□□ -2.2
TY1B-JR1P47098 RDN58-2RDN58-2 158 nt1.31□□□□□ -2.2
TY1B-JR1P47098 YBL081WYBL081W 1107 nt1.31□□□□□ -2.2
TY1B-JR1P47098 YSY6YBR162W-A 198 nt1.31□□□□□ -2.2
TY1B-JR1P47098 AI2Q0055 2565 nt1.31□□□□□ -2.2
TY1B-JR1P47098 EAP1YKL204W 1899 nt1.3□□□□□ -2.2
TY1B-JR1P47098 YGR117CYGR117C 1431 nt1.3□□□□□ -2.2
TY1B-JR1P47098 NST1YNL091W 3723 nt1.3□□□□□ -2.2
TY1B-JR1P47098 PMD1YER132C 5262 nt1.29□□□□□ -2.2
TY1B-JR1P47098 SLY41YOR307C 1362 nt1.29□□□□□ -2.2
TY1B-JR1P47098 RTT101YJL047C 2529 nt1.29□□□□□ -2.2
TY1B-JR1P47098 MPO1YGL010W 525 nt1.29□□□□□ -2.2
TY1B-JR1P47098 PRM9YAR031W 897 nt1.29□□□□□ -2.2
TY1B-JR1P47098 URA5YML106W 681 nt1.29□□□□□ -2.2
TY1B-JR1P47098 YDR170W-AYDR170W-A 1323 nt1.28□□□□□ -2.2
TY1B-JR1P47098 UIP3YAR027W 708 nt1.28□□□□□ -2.2
TY1B-JR1P47098 YML009C-AYML009C-A 327 nt1.28□□□□□ -2.2
TY1B-JR1P47098 PEP12YOR036W 867 nt1.28□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 49.4 ms