Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.3■■■□□ 2.6
KDM5CP41229 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
KDM5CP41229 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
KDM5CP41229 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
KDM5CP41229 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC31.3■■■□□ 2.6
KDM5CP41229 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.3■■■□□ 2.6
KDM5CP41229 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
KDM5CP41229 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
KDM5CP41229 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC31.3■■■□□ 2.6
KDM5CP41229 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
KDM5CP41229 NXN-202ENST00000537628 1340 ntTSL 3 BASIC31.29■■■□□ 2.6
KDM5CP41229 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
KDM5CP41229 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
KDM5CP41229 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
KDM5CP41229 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC31.29■■■□□ 2.6
KDM5CP41229 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.29■■■□□ 2.6
KDM5CP41229 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
KDM5CP41229 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
KDM5CP41229 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
KDM5CP41229 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
KDM5CP41229 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
KDM5CP41229 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
KDM5CP41229 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
KDM5CP41229 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
KDM5CP41229 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
KDM5CP41229 RARRES2P10-201ENST00000564312 460 ntBASIC31.28■■■□□ 2.6
KDM5CP41229 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC31.28■■■□□ 2.6
KDM5CP41229 AL445228.2-201ENST00000605589 952 ntBASIC31.28■■■□□ 2.6
KDM5CP41229 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
KDM5CP41229 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC31.28■■■□□ 2.6
KDM5CP41229 AL135905.2-201ENST00000584934 1404 ntBASIC31.28■■■□□ 2.6
KDM5CP41229 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC31.28■■■□□ 2.6
KDM5CP41229 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
KDM5CP41229 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
KDM5CP41229 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
KDM5CP41229 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.27■■■□□ 2.6
KDM5CP41229 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
KDM5CP41229 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
KDM5CP41229 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
KDM5CP41229 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
KDM5CP41229 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
KDM5CP41229 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC31.27■■■□□ 2.6
KDM5CP41229 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.6
KDM5CP41229 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC31.26■■■□□ 2.6
KDM5CP41229 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
KDM5CP41229 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.26■■■□□ 2.6
KDM5CP41229 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31.26■■■□□ 2.6
KDM5CP41229 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
KDM5CP41229 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
KDM5CP41229 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
KDM5CP41229 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
KDM5CP41229 AL023875.1-201ENST00000640777 796 ntBASIC31.26■■■□□ 2.59
KDM5CP41229 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
KDM5CP41229 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC31.25■■■□□ 2.59
KDM5CP41229 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
KDM5CP41229 AC068473.5-201ENST00000616428 2072 ntBASIC31.25■■■□□ 2.59
KDM5CP41229 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
KDM5CP41229 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
KDM5CP41229 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.25■■■□□ 2.59
KDM5CP41229 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
KDM5CP41229 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC31.25■■■□□ 2.59
KDM5CP41229 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
KDM5CP41229 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
KDM5CP41229 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
KDM5CP41229 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
KDM5CP41229 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
KDM5CP41229 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
KDM5CP41229 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
KDM5CP41229 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
KDM5CP41229 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
KDM5CP41229 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
KDM5CP41229 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
KDM5CP41229 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC31.24■■■□□ 2.59
KDM5CP41229 RN7SL850P-201ENST00000579959 291 ntBASIC31.24■■■□□ 2.59
KDM5CP41229 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.24■■■□□ 2.59
KDM5CP41229 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.24■■■□□ 2.59
KDM5CP41229 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
KDM5CP41229 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC31.23■■■□□ 2.59
KDM5CP41229 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.23■■■□□ 2.59
KDM5CP41229 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC31.23■■■□□ 2.59
KDM5CP41229 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.23■■■□□ 2.59
KDM5CP41229 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
KDM5CP41229 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
KDM5CP41229 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
KDM5CP41229 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
KDM5CP41229 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
KDM5CP41229 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
KDM5CP41229 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
KDM5CP41229 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
KDM5CP41229 LTK-203ENST00000453182 2412 ntTSL 2 BASIC31.22■■■□□ 2.59
KDM5CP41229 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC31.22■■■□□ 2.59
KDM5CP41229 KRASP1-201ENST00000407852 552 ntBASIC31.22■■■□□ 2.59
KDM5CP41229 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC31.22■■■□□ 2.59
KDM5CP41229 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC31.22■■■□□ 2.59
KDM5CP41229 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC31.22■■■□□ 2.59
KDM5CP41229 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
KDM5CP41229 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC31.22■■■□□ 2.59
KDM5CP41229 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
KDM5CP41229 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC31.22■■■□□ 2.59
KDM5CP41229 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms