Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HADHAP40939 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HADHAP40939 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HADHAP40939 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HADHAP40939 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HADHAP40939 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.88■□□□□ 0.93
HADHAP40939 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 AC006128.1-201ENST00000624704 1661 ntBASIC20.88■□□□□ 0.93
HADHAP40939 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.88■□□□□ 0.93
HADHAP40939 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HADHAP40939 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
HADHAP40939 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HADHAP40939 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HADHAP40939 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HADHAP40939 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.87■□□□□ 0.93
HADHAP40939 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHAP40939 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HADHAP40939 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HADHAP40939 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHAP40939 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HADHAP40939 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HADHAP40939 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.87■□□□□ 0.93
HADHAP40939 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.87■□□□□ 0.93
HADHAP40939 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.87■□□□□ 0.93
HADHAP40939 FEM1AP1-201ENST00000431297 1995 ntBASIC20.86■□□□□ 0.93
HADHAP40939 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.86■□□□□ 0.93
HADHAP40939 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HADHAP40939 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HADHAP40939 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HADHAP40939 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHAP40939 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHAP40939 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHAP40939 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHAP40939 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHAP40939 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HADHAP40939 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
HADHAP40939 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHAP40939 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.86■□□□□ 0.93
HADHAP40939 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HADHAP40939 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HADHAP40939 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHAP40939 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HADHAP40939 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.85■□□□□ 0.93
HADHAP40939 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 AL157384.1-201ENST00000445995 2473 ntBASIC20.85■□□□□ 0.93
HADHAP40939 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.85■□□□□ 0.93
HADHAP40939 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HADHAP40939 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.85■□□□□ 0.93
HADHAP40939 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
HADHAP40939 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.85■□□□□ 0.93
HADHAP40939 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.85■□□□□ 0.93
HADHAP40939 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 KRT18P61-201ENST00000585825 1298 ntBASIC20.85■□□□□ 0.93
HADHAP40939 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HADHAP40939 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.85■□□□□ 0.93
HADHAP40939 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHAP40939 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.84■□□□□ 0.93
HADHAP40939 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
HADHAP40939 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.84■□□□□ 0.93
HADHAP40939 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.84■□□□□ 0.93
HADHAP40939 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.84■□□□□ 0.93
HADHAP40939 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.84■□□□□ 0.93
HADHAP40939 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HADHAP40939 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.84■□□□□ 0.93
HADHAP40939 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HADHAP40939 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HADHAP40939 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms