Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MIR718-201ENST00000390190 70 ntBASIC26.41■■□□□ 1.82
COL15A1P39059 KRT17P3-201ENST00000420566 1262 ntBASIC26.41■■□□□ 1.82
COL15A1P39059 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.41■■□□□ 1.82
COL15A1P39059 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.41■■□□□ 1.82
COL15A1P39059 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.41■■□□□ 1.82
COL15A1P39059 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
COL15A1P39059 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL15A1P39059 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.4■■□□□ 1.82
COL15A1P39059 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.4■■□□□ 1.82
COL15A1P39059 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.4■■□□□ 1.82
COL15A1P39059 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL15A1P39059 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL15A1P39059 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.4■■□□□ 1.82
COL15A1P39059 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
COL15A1P39059 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.4■■□□□ 1.82
COL15A1P39059 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.4■■□□□ 1.82
COL15A1P39059 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.4■■□□□ 1.82
COL15A1P39059 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL15A1P39059 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.4■■□□□ 1.82
COL15A1P39059 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.39■■□□□ 1.82
COL15A1P39059 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL15A1P39059 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL15A1P39059 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.39■■□□□ 1.82
COL15A1P39059 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL15A1P39059 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL15A1P39059 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.39■■□□□ 1.82
COL15A1P39059 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.39■■□□□ 1.82
COL15A1P39059 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.39■■□□□ 1.82
COL15A1P39059 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.39■■□□□ 1.82
COL15A1P39059 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.39■■□□□ 1.82
COL15A1P39059 AC105020.6-201ENST00000621523 1217 ntBASIC26.39■■□□□ 1.82
COL15A1P39059 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL15A1P39059 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL15A1P39059 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
COL15A1P39059 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
COL15A1P39059 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.39■■□□□ 1.81
COL15A1P39059 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL15A1P39059 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.38■■□□□ 1.81
COL15A1P39059 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL15A1P39059 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
COL15A1P39059 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL15A1P39059 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL15A1P39059 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL15A1P39059 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.38■■□□□ 1.81
COL15A1P39059 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.38■■□□□ 1.81
COL15A1P39059 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.38■■□□□ 1.81
COL15A1P39059 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL15A1P39059 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
COL15A1P39059 RN7SL471P-201ENST00000580476 299 ntBASIC26.38■■□□□ 1.81
COL15A1P39059 MIR4497-201ENST00000583208 89 ntBASIC26.38■■□□□ 1.81
COL15A1P39059 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.38■■□□□ 1.81
COL15A1P39059 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.38■■□□□ 1.81
COL15A1P39059 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL15A1P39059 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL15A1P39059 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.37■■□□□ 1.81
COL15A1P39059 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL15A1P39059 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.37■■□□□ 1.81
COL15A1P39059 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.37■■□□□ 1.81
COL15A1P39059 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
COL15A1P39059 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL15A1P39059 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
COL15A1P39059 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL15A1P39059 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL15A1P39059 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.36■■□□□ 1.81
COL15A1P39059 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL15A1P39059 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.36■■□□□ 1.81
COL15A1P39059 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.36■■□□□ 1.81
COL15A1P39059 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL15A1P39059 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL15A1P39059 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.35■■□□□ 1.81
COL15A1P39059 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL15A1P39059 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.35■■□□□ 1.81
COL15A1P39059 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.35■■□□□ 1.81
COL15A1P39059 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.35■■□□□ 1.81
COL15A1P39059 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL15A1P39059 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL15A1P39059 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.35■■□□□ 1.81
COL15A1P39059 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.35■■□□□ 1.81
COL15A1P39059 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL15A1P39059 AL117328.2-201ENST00000624617 1940 ntBASIC26.35■■□□□ 1.81
COL15A1P39059 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL15A1P39059 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.34■■□□□ 1.81
COL15A1P39059 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
COL15A1P39059 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL15A1P39059 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL15A1P39059 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL15A1P39059 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.34■■□□□ 1.81
COL15A1P39059 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL15A1P39059 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.34■■□□□ 1.81
COL15A1P39059 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL15A1P39059 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL15A1P39059 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL15A1P39059 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL15A1P39059 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.33■■□□□ 1.81
COL15A1P39059 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL15A1P39059 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.33■■□□□ 1.81
COL15A1P39059 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.33■■□□□ 1.81
COL15A1P39059 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms