Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCNN1AP37088 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCNN1AP37088 AC068338.2-201ENST00000563278 1430 ntBASIC21.58■■□□□ 1.05
SCNN1AP37088 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SCNN1AP37088 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCNN1AP37088 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.58■■□□□ 1.05
SCNN1AP37088 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.58■■□□□ 1.05
SCNN1AP37088 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCNN1AP37088 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCNN1AP37088 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SCNN1AP37088 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCNN1AP37088 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.58■■□□□ 1.04
SCNN1AP37088 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.58■■□□□ 1.04
SCNN1AP37088 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SCNN1AP37088 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.58■■□□□ 1.04
SCNN1AP37088 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCNN1AP37088 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.57■■□□□ 1.04
SCNN1AP37088 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.57■■□□□ 1.04
SCNN1AP37088 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCNN1AP37088 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCNN1AP37088 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.57■■□□□ 1.04
SCNN1AP37088 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.57■■□□□ 1.04
SCNN1AP37088 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.57■■□□□ 1.04
SCNN1AP37088 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCNN1AP37088 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
SCNN1AP37088 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCNN1AP37088 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCNN1AP37088 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.56■■□□□ 1.04
SCNN1AP37088 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SCNN1AP37088 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.56■■□□□ 1.04
SCNN1AP37088 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.56■■□□□ 1.04
SCNN1AP37088 AC007322.1-201ENST00000426983 750 ntBASIC21.56■■□□□ 1.04
SCNN1AP37088 AC080038.1-201ENST00000611274 1154 ntBASIC21.56■■□□□ 1.04
SCNN1AP37088 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.56■■□□□ 1.04
SCNN1AP37088 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SCNN1AP37088 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
SCNN1AP37088 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCNN1AP37088 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
SCNN1AP37088 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SCNN1AP37088 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.55■■□□□ 1.04
SCNN1AP37088 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.55■■□□□ 1.04
SCNN1AP37088 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.55■■□□□ 1.04
SCNN1AP37088 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.55■■□□□ 1.04
SCNN1AP37088 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.55■■□□□ 1.04
SCNN1AP37088 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.55■■□□□ 1.04
SCNN1AP37088 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SCNN1AP37088 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.55■■□□□ 1.04
SCNN1AP37088 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.55■■□□□ 1.04
SCNN1AP37088 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.55■■□□□ 1.04
SCNN1AP37088 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCNN1AP37088 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.54■■□□□ 1.04
SCNN1AP37088 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SCNN1AP37088 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SCNN1AP37088 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.54■■□□□ 1.04
SCNN1AP37088 AC004911.1-201ENST00000416316 871 ntBASIC21.54■■□□□ 1.04
SCNN1AP37088 RARRES2P4-201ENST00000514074 484 ntBASIC21.54■■□□□ 1.04
SCNN1AP37088 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.54■■□□□ 1.04
SCNN1AP37088 AC073111.5-205ENST00000641717 521 ntBASIC21.54■■□□□ 1.04
SCNN1AP37088 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.54■■□□□ 1.04
SCNN1AP37088 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCNN1AP37088 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SCNN1AP37088 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCNN1AP37088 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SCNN1AP37088 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.53■■□□□ 1.04
SCNN1AP37088 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SCNN1AP37088 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCNN1AP37088 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.53■■□□□ 1.04
SCNN1AP37088 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SCNN1AP37088 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms