Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
HMGCLP35914 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGCLP35914 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.62■□□□□ 0.89
HMGCLP35914 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HMGCLP35914 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 RAP2CP1-201ENST00000605103 478 ntBASIC20.62■□□□□ 0.89
HMGCLP35914 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.62■□□□□ 0.89
HMGCLP35914 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HMGCLP35914 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLP35914 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
HMGCLP35914 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
HMGCLP35914 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.61■□□□□ 0.89
HMGCLP35914 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLP35914 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HMGCLP35914 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HMGCLP35914 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLP35914 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HMGCLP35914 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.61■□□□□ 0.89
HMGCLP35914 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.61■□□□□ 0.89
HMGCLP35914 FAM21FP-204ENST00000608637 956 ntBASIC20.61■□□□□ 0.89
HMGCLP35914 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLP35914 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLP35914 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.61■□□□□ 0.89
HMGCLP35914 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HMGCLP35914 AC006128.1-201ENST00000624704 1661 ntBASIC20.61■□□□□ 0.89
HMGCLP35914 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLP35914 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCLP35914 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HMGCLP35914 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
HMGCLP35914 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCLP35914 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCLP35914 AC026185.1-201ENST00000445748 174 ntBASIC20.6■□□□□ 0.89
HMGCLP35914 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.6■□□□□ 0.89
HMGCLP35914 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCLP35914 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLP35914 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCLP35914 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.6■□□□□ 0.89
HMGCLP35914 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCLP35914 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLP35914 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLP35914 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLP35914 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLP35914 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCLP35914 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLP35914 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLP35914 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCLP35914 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HMGCLP35914 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCLP35914 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.59■□□□□ 0.89
HMGCLP35914 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGCLP35914 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
HMGCLP35914 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLP35914 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGCLP35914 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLP35914 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLP35914 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLP35914 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLP35914 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLP35914 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLP35914 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.58■□□□□ 0.89
HMGCLP35914 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HMGCLP35914 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HMGCLP35914 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCLP35914 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCLP35914 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
HMGCLP35914 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.58■□□□□ 0.88
HMGCLP35914 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.58■□□□□ 0.88
HMGCLP35914 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCLP35914 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLP35914 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLP35914 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.57■□□□□ 0.88
HMGCLP35914 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLP35914 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLP35914 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HMGCLP35914 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLP35914 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.57■□□□□ 0.88
HMGCLP35914 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCLP35914 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCLP35914 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms