Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.3■■□□□ 1
SLC6A4P31645 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.3■■□□□ 1
SLC6A4P31645 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.3■■□□□ 1
SLC6A4P31645 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 FEM1AP4-201ENST00000443167 1987 ntBASIC21.3■■□□□ 1
SLC6A4P31645 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A4P31645 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.29■■□□□ 1
SLC6A4P31645 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLC6A4P31645 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
SLC6A4P31645 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC6A4P31645 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SLC6A4P31645 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC6A4P31645 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC6A4P31645 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.29■■□□□ 1
SLC6A4P31645 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.29■■□□□ 1
SLC6A4P31645 AC069152.1-201ENST00000438030 544 ntBASIC21.29■■□□□ 1
SLC6A4P31645 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.29■■□□□ 1
SLC6A4P31645 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.29■■□□□ 1
SLC6A4P31645 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.29■■□□□ 1
SLC6A4P31645 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLC6A4P31645 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC6A4P31645 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.29■■□□□ 1
SLC6A4P31645 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SLC6A4P31645 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC6A4P31645 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.28■■□□□ 1
SLC6A4P31645 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A4P31645 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC6A4P31645 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC6A4P31645 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A4P31645 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.28■■□□□ 1
SLC6A4P31645 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC6A4P31645 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.28■■□□□ 1
SLC6A4P31645 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A4P31645 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC6A4P31645 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC6A4P31645 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.28■■□□□ 1
SLC6A4P31645 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.28■■□□□ 1
SLC6A4P31645 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.28■■□□□ 1
SLC6A4P31645 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.28■■□□□ 1
SLC6A4P31645 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SLC6A4P31645 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SLC6A4P31645 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SLC6A4P31645 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC6A4P31645 AF106564.1-201ENST00000607058 2553 ntBASIC21.28■■□□□ 1
SLC6A4P31645 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A4P31645 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC6A4P31645 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A4P31645 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.27■■□□□ 1
SLC6A4P31645 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.27■■□□□ 1
SLC6A4P31645 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.27■■□□□ 1
SLC6A4P31645 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A4P31645 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.27■■□□□ 1
SLC6A4P31645 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A4P31645 AC026310.3-201ENST00000625186 2373 ntBASIC21.27■■□□□ 1
SLC6A4P31645 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC6A4P31645 AL049796.1-201ENST00000565336 1766 ntBASIC21.27■■□□□ 1
SLC6A4P31645 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A4P31645 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A4P31645 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A4P31645 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC6A4P31645 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC6A4P31645 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLC6A4P31645 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC6A4P31645 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 KRT17P1-201ENST00000399211 1546 ntBASIC21.26■□□□□ 0.99
SLC6A4P31645 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC6A4P31645 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC6A4P31645 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.26■□□□□ 0.99
SLC6A4P31645 AC073210.2-201ENST00000430369 194 ntBASIC21.26■□□□□ 0.99
SLC6A4P31645 MIR4758-201ENST00000577688 71 ntBASIC21.26■□□□□ 0.99
SLC6A4P31645 AC092118.2-201ENST00000613495 667 ntBASIC21.26■□□□□ 0.99
SLC6A4P31645 AC133041.1-202ENST00000642053 222 ntBASIC21.26■□□□□ 0.99
SLC6A4P31645 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A4P31645 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC6A4P31645 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC6A4P31645 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A4P31645 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A4P31645 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A4P31645 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC6A4P31645 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC6A4P31645 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SLC6A4P31645 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.25■□□□□ 0.99
SLC6A4P31645 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A4P31645 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.25■□□□□ 0.99
SLC6A4P31645 CYP2T3P-201ENST00000601990 817 ntBASIC21.25■□□□□ 0.99
SLC6A4P31645 AC100791.3-201ENST00000617619 330 ntBASIC21.25■□□□□ 0.99
SLC6A4P31645 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A4P31645 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A4P31645 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms