Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.86■□□□□ 0.93
XPAP23025 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.86■□□□□ 0.93
XPAP23025 AC016405.3-201ENST00000607710 860 ntBASIC20.86■□□□□ 0.93
XPAP23025 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.86■□□□□ 0.93
XPAP23025 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
XPAP23025 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
XPAP23025 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
XPAP23025 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
XPAP23025 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.85■□□□□ 0.93
XPAP23025 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.85■□□□□ 0.93
XPAP23025 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.85■□□□□ 0.93
XPAP23025 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
XPAP23025 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
XPAP23025 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.85■□□□□ 0.93
XPAP23025 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XPAP23025 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
XPAP23025 Z98882.1-201ENST00000622160 2253 ntBASIC20.84■□□□□ 0.93
XPAP23025 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
XPAP23025 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
XPAP23025 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
XPAP23025 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
XPAP23025 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
XPAP23025 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.84■□□□□ 0.93
XPAP23025 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
XPAP23025 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
XPAP23025 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XPAP23025 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.84■□□□□ 0.93
XPAP23025 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
XPAP23025 MKRN4P-201ENST00000444706 1521 ntBASIC20.83■□□□□ 0.93
XPAP23025 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
XPAP23025 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.83■□□□□ 0.93
XPAP23025 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
XPAP23025 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
XPAP23025 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.83■□□□□ 0.93
XPAP23025 TSPY6P-201ENST00000448518 926 ntBASIC20.83■□□□□ 0.93
XPAP23025 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.83■□□□□ 0.93
XPAP23025 RARRES2P4-201ENST00000514074 484 ntBASIC20.83■□□□□ 0.93
XPAP23025 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
XPAP23025 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
XPAP23025 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
XPAP23025 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
XPAP23025 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.83■□□□□ 0.92
XPAP23025 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
XPAP23025 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
XPAP23025 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.83■□□□□ 0.92
XPAP23025 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.83■□□□□ 0.92
XPAP23025 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 AC007322.3-201ENST00000426526 701 ntBASIC20.82■□□□□ 0.92
XPAP23025 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.82■□□□□ 0.92
XPAP23025 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.82■□□□□ 0.92
XPAP23025 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.82■□□□□ 0.92
XPAP23025 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
XPAP23025 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
XPAP23025 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
XPAP23025 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
XPAP23025 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.81■□□□□ 0.92
XPAP23025 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
XPAP23025 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.81■□□□□ 0.92
XPAP23025 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.81■□□□□ 0.92
XPAP23025 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
XPAP23025 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
XPAP23025 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.81■□□□□ 0.92
XPAP23025 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XPAP23025 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.81■□□□□ 0.92
XPAP23025 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.8■□□□□ 0.92
XPAP23025 AC079834.2-201ENST00000609776 1949 ntBASIC20.8■□□□□ 0.92
XPAP23025 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.8■□□□□ 0.92
XPAP23025 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms