Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CAPN3P20807 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.87■□□□□ 0.77
CAPN3P20807 AC099791.1-201ENST00000416440 715 ntBASIC19.87■□□□□ 0.77
CAPN3P20807 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.87■□□□□ 0.77
CAPN3P20807 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.87■□□□□ 0.77
CAPN3P20807 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.87■□□□□ 0.77
CAPN3P20807 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CAPN3P20807 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.87■□□□□ 0.77
CAPN3P20807 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CAPN3P20807 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
CAPN3P20807 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.87■□□□□ 0.77
CAPN3P20807 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.87■□□□□ 0.77
CAPN3P20807 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CAPN3P20807 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN3P20807 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CAPN3P20807 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN3P20807 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.86■□□□□ 0.77
CAPN3P20807 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN3P20807 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN3P20807 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN3P20807 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.86■□□□□ 0.77
CAPN3P20807 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.86■□□□□ 0.77
CAPN3P20807 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN3P20807 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.86■□□□□ 0.77
CAPN3P20807 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.85■□□□□ 0.77
CAPN3P20807 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CAPN3P20807 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CAPN3P20807 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.85■□□□□ 0.77
CAPN3P20807 IKBKGP1-201ENST00000612193 1073 ntBASIC19.85■□□□□ 0.77
CAPN3P20807 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CAPN3P20807 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CAPN3P20807 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.85■□□□□ 0.77
CAPN3P20807 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN3P20807 AC112907.3-201ENST00000577781 2400 ntBASIC19.84■□□□□ 0.77
CAPN3P20807 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN3P20807 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
CAPN3P20807 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN3P20807 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN3P20807 BX842568.3-201ENST00000418104 571 ntBASIC19.84■□□□□ 0.77
CAPN3P20807 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN3P20807 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CAPN3P20807 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.84■□□□□ 0.77
CAPN3P20807 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN3P20807 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CAPN3P20807 BX005040.4-201ENST00000637145 1518 ntBASIC19.84■□□□□ 0.77
CAPN3P20807 AL512408.1-201ENST00000569378 2000 ntBASIC19.84■□□□□ 0.77
CAPN3P20807 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.84■□□□□ 0.77
CAPN3P20807 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN3P20807 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN3P20807 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CAPN3P20807 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CAPN3P20807 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN3P20807 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN3P20807 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN3P20807 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN3P20807 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.83■□□□□ 0.77
CAPN3P20807 AL162377.1-201ENST00000618844 1793 ntBASIC19.83■□□□□ 0.77
CAPN3P20807 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CAPN3P20807 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CAPN3P20807 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CAPN3P20807 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN3P20807 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CAPN3P20807 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN3P20807 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN3P20807 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN3P20807 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.83■□□□□ 0.77
CAPN3P20807 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.83■□□□□ 0.77
CAPN3P20807 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.83■□□□□ 0.77
CAPN3P20807 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN3P20807 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN3P20807 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN3P20807 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN3P20807 AC009237.3-201ENST00000393279 1427 ntBASIC19.83■□□□□ 0.76
CAPN3P20807 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CAPN3P20807 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN3P20807 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN3P20807 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN3P20807 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN3P20807 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms