Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 PLK5-205ENST00000642079 1969 ntBASIC20.86■□□□□ 0.93
HLA-DPA1P20036 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 AC006128.1-201ENST00000624704 1661 ntBASIC20.85■□□□□ 0.93
HLA-DPA1P20036 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HLA-DPA1P20036 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 AC006015.1-201ENST00000429970 570 ntBASIC20.84■□□□□ 0.93
HLA-DPA1P20036 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DPA1P20036 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 AC091799.1-201ENST00000422823 811 ntBASIC20.83■□□□□ 0.93
HLA-DPA1P20036 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 AC010536.3-201ENST00000620306 533 ntBASIC20.83■□□□□ 0.93
HLA-DPA1P20036 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DPA1P20036 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.83■□□□□ 0.92
HLA-DPA1P20036 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DPA1P20036 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 AC116050.2-201ENST00000612102 1779 ntBASIC20.82■□□□□ 0.92
HLA-DPA1P20036 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 AC092666.2-201ENST00000613287 246 ntBASIC20.82■□□□□ 0.92
HLA-DPA1P20036 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DPA1P20036 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 TERF1P5-201ENST00000477545 1207 ntBASIC20.81■□□□□ 0.92
HLA-DPA1P20036 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DPA1P20036 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms