Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.56■■□□□ 1.04
PSMC3P17980 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 CYP2T3P-201ENST00000601990 817 ntBASIC21.56■■□□□ 1.04
PSMC3P17980 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.56■■□□□ 1.04
PSMC3P17980 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PSMC3P17980 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.56■■□□□ 1.04
PSMC3P17980 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PSMC3P17980 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.55■■□□□ 1.04
PSMC3P17980 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PSMC3P17980 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PSMC3P17980 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PSMC3P17980 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.55■■□□□ 1.04
PSMC3P17980 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.55■■□□□ 1.04
PSMC3P17980 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PSMC3P17980 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.55■■□□□ 1.04
PSMC3P17980 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.55■■□□□ 1.04
PSMC3P17980 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.55■■□□□ 1.04
PSMC3P17980 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.55■■□□□ 1.04
PSMC3P17980 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.55■■□□□ 1.04
PSMC3P17980 AC073648.6-201ENST00000641589 218 ntBASIC21.55■■□□□ 1.04
PSMC3P17980 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PSMC3P17980 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PSMC3P17980 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PSMC3P17980 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.55■■□□□ 1.04
PSMC3P17980 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.55■■□□□ 1.04
PSMC3P17980 AC007375.3-201ENST00000600936 2314 ntBASIC21.55■■□□□ 1.04
PSMC3P17980 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
PSMC3P17980 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.55■■□□□ 1.04
PSMC3P17980 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PSMC3P17980 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PSMC3P17980 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.54■■□□□ 1.04
PSMC3P17980 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.54■■□□□ 1.04
PSMC3P17980 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.54■■□□□ 1.04
PSMC3P17980 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.54■■□□□ 1.04
PSMC3P17980 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.54■■□□□ 1.04
PSMC3P17980 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.54■■□□□ 1.04
PSMC3P17980 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.54■■□□□ 1.04
PSMC3P17980 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
PSMC3P17980 GUSBP5-202ENST00000510805 1989 ntBASIC21.54■■□□□ 1.04
PSMC3P17980 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PSMC3P17980 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PSMC3P17980 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PSMC3P17980 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PSMC3P17980 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PSMC3P17980 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PSMC3P17980 RPS2P4-201ENST00000476944 856 ntBASIC21.53■■□□□ 1.04
PSMC3P17980 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PSMC3P17980 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.53■■□□□ 1.04
PSMC3P17980 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PSMC3P17980 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PSMC3P17980 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PSMC3P17980 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PSMC3P17980 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PSMC3P17980 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.52■■□□□ 1.04
PSMC3P17980 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.52■■□□□ 1.04
PSMC3P17980 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 AC060766.5-201ENST00000590539 871 ntBASIC21.52■■□□□ 1.04
PSMC3P17980 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PSMC3P17980 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PSMC3P17980 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.52■■□□□ 1.04
PSMC3P17980 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PSMC3P17980 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PSMC3P17980 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PSMC3P17980 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PSMC3P17980 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.51■■□□□ 1.03
PSMC3P17980 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.51■■□□□ 1.03
PSMC3P17980 UNC93B4-201ENST00000505679 747 ntBASIC21.51■■□□□ 1.03
PSMC3P17980 AL589743.5-201ENST00000616611 1050 ntBASIC21.51■■□□□ 1.03
PSMC3P17980 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.51■■□□□ 1.03
PSMC3P17980 HLA-B-256ENST00000639848 1089 ntBASIC21.51■■□□□ 1.03
PSMC3P17980 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PSMC3P17980 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PSMC3P17980 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PSMC3P17980 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms