Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL3L1P16619 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL3L1P16619 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL3L1P16619 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL3L1P16619 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL3L1P16619 AC091799.1-201ENST00000422823 811 ntBASIC17.06■□□□□ 0.32
CCL3L1P16619 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL3L1P16619 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL3L1P16619 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL3L1P16619 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL3L1P16619 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.06■□□□□ 0.32
CCL3L1P16619 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL3L1P16619 AC013268.1-206ENST00000638368 961 ntBASIC17.06■□□□□ 0.32
CCL3L1P16619 AC112229.1-201ENST00000639295 961 ntBASIC17.06■□□□□ 0.32
CCL3L1P16619 AC073111.5-205ENST00000641717 521 ntBASIC17.06■□□□□ 0.32
CCL3L1P16619 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL3L1P16619 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL3L1P16619 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCL3L1P16619 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CCL3L1P16619 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL3L1P16619 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL3L1P16619 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCL3L1P16619 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCL3L1P16619 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CCL3L1P16619 CNN2P6-201ENST00000439038 900 ntBASIC17.05■□□□□ 0.32
CCL3L1P16619 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.05■□□□□ 0.32
CCL3L1P16619 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL3L1P16619 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.04■□□□□ 0.32
CCL3L1P16619 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCL3L1P16619 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.04■□□□□ 0.32
CCL3L1P16619 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.04■□□□□ 0.32
CCL3L1P16619 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCL3L1P16619 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL3L1P16619 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCL3L1P16619 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
CCL3L1P16619 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCL3L1P16619 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 CDCA4P2-201ENST00000441182 718 ntBASIC17.03■□□□□ 0.32
CCL3L1P16619 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.03■□□□□ 0.32
CCL3L1P16619 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 AC121338.2-201ENST00000622535 1744 ntBASIC17.03■□□□□ 0.32
CCL3L1P16619 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.03■□□□□ 0.32
CCL3L1P16619 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.03■□□□□ 0.32
CCL3L1P16619 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL3L1P16619 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCL3L1P16619 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL3L1P16619 PLK5-205ENST00000642079 1969 ntBASIC17.02■□□□□ 0.32
CCL3L1P16619 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.02■□□□□ 0.32
CCL3L1P16619 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL3L1P16619 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCL3L1P16619 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.02■□□□□ 0.32
CCL3L1P16619 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CCL3L1P16619 AC007322.1-201ENST00000426983 750 ntBASIC17.02■□□□□ 0.32
CCL3L1P16619 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.02■□□□□ 0.32
CCL3L1P16619 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.02■□□□□ 0.32
CCL3L1P16619 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.02■□□□□ 0.32
CCL3L1P16619 AC231657.2-201ENST00000624556 255 ntBASIC17.02■□□□□ 0.32
CCL3L1P16619 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CCL3L1P16619 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL3L1P16619 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.02■□□□□ 0.32
CCL3L1P16619 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms