Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.08■□□□□ 0.64
PEPDP12955 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEPDP12955 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEPDP12955 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
PEPDP12955 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
PEPDP12955 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PEPDP12955 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.07■□□□□ 0.64
PEPDP12955 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.07■□□□□ 0.64
PEPDP12955 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.07■□□□□ 0.64
PEPDP12955 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PEPDP12955 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.07■□□□□ 0.64
PEPDP12955 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEPDP12955 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEPDP12955 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PEPDP12955 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PEPDP12955 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PEPDP12955 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.06■□□□□ 0.64
PEPDP12955 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEPDP12955 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEPDP12955 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.06■□□□□ 0.64
PEPDP12955 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PEPDP12955 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEPDP12955 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.06■□□□□ 0.64
PEPDP12955 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.06■□□□□ 0.64
PEPDP12955 AC008175.2-201ENST00000612840 297 ntBASIC19.06■□□□□ 0.64
PEPDP12955 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.06■□□□□ 0.64
PEPDP12955 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.06■□□□□ 0.64
PEPDP12955 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PEPDP12955 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PEPDP12955 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PEPDP12955 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PEPDP12955 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PEPDP12955 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.05■□□□□ 0.64
PEPDP12955 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 BID-214ENST00000617586 542 ntTSL 5 BASIC19.05■□□□□ 0.64
PEPDP12955 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.05■□□□□ 0.64
PEPDP12955 AL049796.1-201ENST00000565336 1766 ntBASIC19.05■□□□□ 0.64
PEPDP12955 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.05■□□□□ 0.64
PEPDP12955 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.05■□□□□ 0.64
PEPDP12955 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PEPDP12955 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEPDP12955 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.04■□□□□ 0.64
PEPDP12955 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.04■□□□□ 0.64
PEPDP12955 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.04■□□□□ 0.64
PEPDP12955 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PEPDP12955 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.04■□□□□ 0.64
PEPDP12955 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.04■□□□□ 0.64
PEPDP12955 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.04■□□□□ 0.64
PEPDP12955 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.04■□□□□ 0.64
PEPDP12955 AC120498.10-201ENST00000621827 505 ntBASIC19.04■□□□□ 0.64
PEPDP12955 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PEPDP12955 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PEPDP12955 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.04■□□□□ 0.64
PEPDP12955 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PEPDP12955 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
PEPDP12955 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PEPDP12955 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms