Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 LINC01023-201ENST00000606054 436 ntBASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.55■■■□□ 2
CSB-PGBD3P0DP91 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 TSPY7P-201ENST00000431358 1114 ntBASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 THEM4-205ENST00000489410 643 ntTSL 2 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 RPS20-210ENST00000523936 899 ntTSL 2 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 C2orf69P4-201ENST00000565394 541 ntBASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
CSB-PGBD3P0DP91 FAM99A-202ENST00000538190 1989 ntBASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 AC012618.2-201ENST00000428058 849 ntBASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 AC233702.5-201ENST00000584107 538 ntBASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 AL023875.1-201ENST00000640777 796 ntBASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.53■■■□□ 2
CSB-PGBD3P0DP91 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 RPS2P55-201ENST00000397318 883 ntBASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 AC107956.1-201ENST00000494359 873 ntBASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 BX088651.1-201ENST00000540551 451 ntBASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 AC116050.2-201ENST00000612102 1779 ntBASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.52■■■□□ 2
CSB-PGBD3P0DP91 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC27.51■■■□□ 2
CSB-PGBD3P0DP91 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■■□□ 2
CSB-PGBD3P0DP91 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 LY6E-205ENST00000519611 635 ntTSL 3 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 MTDHP1-201ENST00000605323 784 ntBASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CSB-PGBD3P0DP91 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 KRT18P21-201ENST00000515767 1272 ntBASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms