Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CD48P09326 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CD48P09326 PKD1P6-201ENST00000343738 4769 ntBASIC21.44■■□□□ 1.02
CD48P09326 AC007225.1-201ENST00000566331 1836 ntBASIC21.44■■□□□ 1.02
CD48P09326 KRT19P1-201ENST00000405746 1186 ntBASIC21.44■■□□□ 1.02
CD48P09326 AC026271.2-201ENST00000428091 497 ntBASIC21.44■■□□□ 1.02
CD48P09326 AC245052.3-201ENST00000450182 901 ntBASIC21.44■■□□□ 1.02
CD48P09326 KRT18P20-201ENST00000548986 1279 ntBASIC21.44■■□□□ 1.02
CD48P09326 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.44■■□□□ 1.02
CD48P09326 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.44■■□□□ 1.02
CD48P09326 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CD48P09326 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD48P09326 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.43■■□□□ 1.02
CD48P09326 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
CD48P09326 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.43■■□□□ 1.02
CD48P09326 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.43■■□□□ 1.02
CD48P09326 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.43■■□□□ 1.02
CD48P09326 UBE2DNL-204ENST00000602536 740 ntBASIC21.43■■□□□ 1.02
CD48P09326 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CD48P09326 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.43■■□□□ 1.02
CD48P09326 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CD48P09326 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.43■■□□□ 1.02
CD48P09326 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.43■■□□□ 1.02
CD48P09326 FP700111.2-201ENST00000619190 1892 ntBASIC21.43■■□□□ 1.02
CD48P09326 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD48P09326 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD48P09326 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD48P09326 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD48P09326 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.42■■□□□ 1.02
CD48P09326 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD48P09326 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CD48P09326 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
CD48P09326 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.42■■□□□ 1.02
CD48P09326 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.42■■□□□ 1.02
CD48P09326 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD48P09326 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.42■■□□□ 1.02
CD48P09326 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.42■■□□□ 1.02
CD48P09326 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.42■■□□□ 1.02
CD48P09326 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.42■■□□□ 1.02
CD48P09326 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.42■■□□□ 1.02
CD48P09326 AC019069.1-201ENST00000610008 1333 ntBASIC21.42■■□□□ 1.02
CD48P09326 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD48P09326 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD48P09326 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CD48P09326 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 AP005212.1-201ENST00000581547 1997 ntBASIC21.41■■□□□ 1.02
CD48P09326 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.41■■□□□ 1.02
CD48P09326 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 AC027702.1-201ENST00000563810 1770 ntBASIC21.41■■□□□ 1.02
CD48P09326 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CD48P09326 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
CD48P09326 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.41■■□□□ 1.02
CD48P09326 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CD48P09326 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 RARRES2P6-201ENST00000567333 442 ntBASIC21.41■■□□□ 1.02
CD48P09326 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CD48P09326 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 LINC01521-201ENST00000504184 1943 ntBASIC21.41■■□□□ 1.02
CD48P09326 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.41■■□□□ 1.02
CD48P09326 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.41■■□□□ 1.02
CD48P09326 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD48P09326 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.4■■□□□ 1.02
CD48P09326 RBM17P2-201ENST00000616397 1405 ntBASIC21.4■■□□□ 1.02
CD48P09326 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD48P09326 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CD48P09326 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CD48P09326 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD48P09326 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD48P09326 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.4■■□□□ 1.02
CD48P09326 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.4■■□□□ 1.02
CD48P09326 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD48P09326 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms