Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 AP005435.1-201ENST00000529293 1178 ntBASIC23.14■■□□□ 1.29
TPM3P06753 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.14■■□□□ 1.29
TPM3P06753 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.14■■□□□ 1.29
TPM3P06753 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TPM3P06753 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TPM3P06753 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TPM3P06753 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TPM3P06753 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TPM3P06753 AL162377.1-201ENST00000618844 1793 ntBASIC23.13■■□□□ 1.29
TPM3P06753 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TPM3P06753 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.13■■□□□ 1.29
TPM3P06753 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TPM3P06753 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.13■■□□□ 1.29
TPM3P06753 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TPM3P06753 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.12■■□□□ 1.29
TPM3P06753 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 AIRN-201ENST00000601203 4374 ntBASIC23.12■■□□□ 1.29
TPM3P06753 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.12■■□□□ 1.29
TPM3P06753 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TPM3P06753 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TPM3P06753 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TPM3P06753 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TPM3P06753 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TPM3P06753 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.11■■□□□ 1.29
TPM3P06753 MIR3621-201ENST00000580529 85 ntBASIC23.11■■□□□ 1.29
TPM3P06753 AL138724.1-201ENST00000606771 1088 ntBASIC23.11■■□□□ 1.29
TPM3P06753 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.11■■□□□ 1.29
TPM3P06753 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.11■■□□□ 1.29
TPM3P06753 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.11■■□□□ 1.29
TPM3P06753 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TPM3P06753 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TPM3P06753 AC007225.1-201ENST00000566331 1836 ntBASIC23.1■■□□□ 1.29
TPM3P06753 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.1■■□□□ 1.29
TPM3P06753 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TPM3P06753 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.1■■□□□ 1.29
TPM3P06753 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.1■■□□□ 1.29
TPM3P06753 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TPM3P06753 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TPM3P06753 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TPM3P06753 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.1■■□□□ 1.29
TPM3P06753 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.1■■□□□ 1.29
TPM3P06753 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TPM3P06753 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TPM3P06753 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TPM3P06753 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TPM3P06753 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.09■■□□□ 1.29
TPM3P06753 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.09■■□□□ 1.29
TPM3P06753 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TPM3P06753 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
TPM3P06753 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.09■■□□□ 1.29
TPM3P06753 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TPM3P06753 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TPM3P06753 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.09■■□□□ 1.29
TPM3P06753 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
TPM3P06753 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TPM3P06753 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TPM3P06753 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TPM3P06753 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TPM3P06753 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.08■■□□□ 1.29
TPM3P06753 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.08■■□□□ 1.29
TPM3P06753 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.08■■□□□ 1.29
TPM3P06753 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.08■■□□□ 1.29
TPM3P06753 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.08■■□□□ 1.29
TPM3P06753 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
TPM3P06753 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TPM3P06753 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TPM3P06753 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.08■■□□□ 1.28
TPM3P06753 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.08■■□□□ 1.28
TPM3P06753 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TPM3P06753 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.07■■□□□ 1.28
TPM3P06753 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TPM3P06753 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TPM3P06753 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TPM3P06753 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TPM3P06753 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.07■■□□□ 1.28
TPM3P06753 AC121338.2-201ENST00000622535 1744 ntBASIC23.07■■□□□ 1.28
TPM3P06753 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TPM3P06753 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TPM3P06753 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TPM3P06753 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TPM3P06753 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TPM3P06753 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.06■■□□□ 1.28
TPM3P06753 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms