Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 pRNA.6-201ENST00000610482 90 ntBASIC17.88■□□□□ 0.45
HLA-DQB1P01920 pRNA.5-201ENST00000612139 90 ntBASIC17.88■□□□□ 0.45
HLA-DQB1P01920 pRNA.11-201ENST00000618423 90 ntBASIC17.88■□□□□ 0.45
HLA-DQB1P01920 pRNA.13-201ENST00000619112 90 ntBASIC17.88■□□□□ 0.45
HLA-DQB1P01920 AC087239.1-201ENST00000622671 572 ntBASIC17.88■□□□□ 0.45
HLA-DQB1P01920 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 TSPY9P-201ENST00000440215 945 ntBASIC17.87■□□□□ 0.45
HLA-DQB1P01920 TSPY11P-201ENST00000442607 1045 ntBASIC17.87■□□□□ 0.45
HLA-DQB1P01920 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DQB1P01920 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 AL117332.1-201ENST00000622628 974 ntBASIC17.86■□□□□ 0.45
HLA-DQB1P01920 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DQB1P01920 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 AC006455.2-201ENST00000429931 906 ntBASIC17.85■□□□□ 0.45
HLA-DQB1P01920 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 MIR6724-1-201ENST00000616420 92 ntBASIC17.85■□□□□ 0.45
HLA-DQB1P01920 MIR6724-2-201ENST00000616483 92 ntBASIC17.85■□□□□ 0.45
HLA-DQB1P01920 MIR6724-4-201ENST00000617390 92 ntBASIC17.85■□□□□ 0.45
HLA-DQB1P01920 MIR6724-3-201ENST00000622482 92 ntBASIC17.85■□□□□ 0.45
HLA-DQB1P01920 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB1P01920 AL158211.5-201ENST00000623583 2518 ntBASIC17.84■□□□□ 0.45
HLA-DQB1P01920 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 OR2I1P-207ENST00000453522 948 ntBASIC17.84■□□□□ 0.45
HLA-DQB1P01920 RARRES2P1-201ENST00000474487 481 ntBASIC17.84■□□□□ 0.45
HLA-DQB1P01920 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB1P01920 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB1P01920 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB1P01920 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
HLA-DQB1P01920 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DQB1P01920 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DQB1P01920 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB1P01920 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 AC009299.2-201ENST00000482477 511 ntBASIC17.83■□□□□ 0.44
HLA-DQB1P01920 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms