Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.58■□□□□ 0.89
PRAMEF1O95521 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.58■□□□□ 0.89
PRAMEF1O95521 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEF1O95521 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF1O95521 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF1O95521 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.58■□□□□ 0.88
PRAMEF1O95521 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
PRAMEF1O95521 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 PLK5-205ENST00000642079 1969 ntBASIC20.57■□□□□ 0.88
PRAMEF1O95521 AC116050.2-201ENST00000612102 1779 ntBASIC20.57■□□□□ 0.88
PRAMEF1O95521 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PRAMEF1O95521 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 CNN2P6-201ENST00000439038 900 ntBASIC20.57■□□□□ 0.88
PRAMEF1O95521 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 AC007322.4-201ENST00000509611 723 ntBASIC20.57■□□□□ 0.88
PRAMEF1O95521 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.57■□□□□ 0.88
PRAMEF1O95521 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF1O95521 AC080038.1-201ENST00000611274 1154 ntBASIC20.57■□□□□ 0.88
PRAMEF1O95521 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 AC011484.1-201ENST00000377652 1995 ntBASIC20.57■□□□□ 0.88
PRAMEF1O95521 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF1O95521 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF1O95521 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF1O95521 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF1O95521 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF1O95521 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF1O95521 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF1O95521 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF1O95521 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEF1O95521 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF1O95521 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRAMEF1O95521 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PRAMEF1O95521 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF1O95521 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.55■□□□□ 0.88
PRAMEF1O95521 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF1O95521 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF1O95521 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PRAMEF1O95521 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PRAMEF1O95521 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF1O95521 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
PRAMEF1O95521 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF1O95521 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF1O95521 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF1O95521 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 AL591742.1-201ENST00000604433 565 ntBASIC20.54■□□□□ 0.88
PRAMEF1O95521 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 AC231657.2-201ENST00000624556 255 ntBASIC20.54■□□□□ 0.88
PRAMEF1O95521 AC073111.5-205ENST00000641717 521 ntBASIC20.54■□□□□ 0.88
PRAMEF1O95521 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PRAMEF1O95521 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF1O95521 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF1O95521 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PRAMEF1O95521 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEF1O95521 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRAMEF1O95521 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 CDV3P1-201ENST00000471403 739 ntBASIC20.53■□□□□ 0.88
PRAMEF1O95521 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF1O95521 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms