Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH8O95206 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDH8O95206 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH8O95206 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH8O95206 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH8O95206 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH8O95206 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH8O95206 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDH8O95206 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH8O95206 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 EP400NL-214ENST00000641289 2402 ntBASIC20.67■□□□□ 0.9
PCDH8O95206 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH8O95206 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDH8O95206 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.67■□□□□ 0.9
PCDH8O95206 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH8O95206 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH8O95206 FAM201B-201ENST00000458407 597 ntBASIC20.67■□□□□ 0.9
PCDH8O95206 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 TMEM191A-211ENST00000637163 1067 ntBASIC20.67■□□□□ 0.9
PCDH8O95206 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDH8O95206 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH8O95206 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH8O95206 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 KRT17P1-201ENST00000399211 1546 ntBASIC20.67■□□□□ 0.9
PCDH8O95206 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDH8O95206 AC116050.2-201ENST00000612102 1779 ntBASIC20.67■□□□□ 0.9
PCDH8O95206 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH8O95206 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDH8O95206 MCRIP2P1-201ENST00000394346 511 ntBASIC20.66■□□□□ 0.9
PCDH8O95206 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.66■□□□□ 0.9
PCDH8O95206 CYP2T3P-201ENST00000601990 817 ntBASIC20.66■□□□□ 0.9
PCDH8O95206 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDH8O95206 AC083880.1-201ENST00000608266 535 ntBASIC20.66■□□□□ 0.9
PCDH8O95206 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH8O95206 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH8O95206 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDH8O95206 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH8O95206 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDH8O95206 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PCDH8O95206 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH8O95206 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH8O95206 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.65■□□□□ 0.9
PCDH8O95206 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDH8O95206 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PCDH8O95206 MYC-209ENST00000641252 345 ntBASIC20.65■□□□□ 0.9
PCDH8O95206 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDH8O95206 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 FBXW4P1-201ENST00000426721 2239 ntBASIC20.65■□□□□ 0.9
PCDH8O95206 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
PCDH8O95206 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH8O95206 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH8O95206 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH8O95206 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDH8O95206 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH8O95206 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PCDH8O95206 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDH8O95206 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDH8O95206 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH8O95206 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDH8O95206 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
PCDH8O95206 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
PCDH8O95206 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDH8O95206 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH8O95206 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH8O95206 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDH8O95206 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH8O95206 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDH8O95206 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.64■□□□□ 0.89
PCDH8O95206 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH8O95206 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDH8O95206 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms