Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.49■□□□□ 0.55
UBL3O95164 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL3O95164 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL3O95164 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL3O95164 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.49■□□□□ 0.55
UBL3O95164 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.49■□□□□ 0.55
UBL3O95164 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL3O95164 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL3O95164 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UBL3O95164 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL3O95164 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL3O95164 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UBL3O95164 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
UBL3O95164 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.48■□□□□ 0.55
UBL3O95164 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.48■□□□□ 0.55
UBL3O95164 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL3O95164 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UBL3O95164 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.47■□□□□ 0.55
UBL3O95164 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.47■□□□□ 0.55
UBL3O95164 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.47■□□□□ 0.55
UBL3O95164 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.47■□□□□ 0.55
UBL3O95164 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.47■□□□□ 0.55
UBL3O95164 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL3O95164 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBL3O95164 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
UBL3O95164 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
UBL3O95164 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL3O95164 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
UBL3O95164 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
UBL3O95164 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL3O95164 KRT19P1-201ENST00000405746 1186 ntBASIC18.46■□□□□ 0.55
UBL3O95164 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL3O95164 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.46■□□□□ 0.55
UBL3O95164 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
UBL3O95164 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
UBL3O95164 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL3O95164 AP004607.4-201ENST00000530158 1459 ntBASIC18.46■□□□□ 0.54
UBL3O95164 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL3O95164 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL3O95164 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
UBL3O95164 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBL3O95164 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.45■□□□□ 0.54
UBL3O95164 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL3O95164 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL3O95164 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL3O95164 NTF6G-201ENST00000591094 616 ntBASIC18.45■□□□□ 0.54
UBL3O95164 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.45■□□□□ 0.54
UBL3O95164 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL3O95164 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL3O95164 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 AC004854.2-201ENST00000608450 1441 ntBASIC18.45■□□□□ 0.54
UBL3O95164 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL3O95164 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL3O95164 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBL3O95164 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
UBL3O95164 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.44■□□□□ 0.54
UBL3O95164 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBL3O95164 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBL3O95164 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms