Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SOX30O94993 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SOX30O94993 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SOX30O94993 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.2■□□□□ 0.66
SOX30O94993 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.2■□□□□ 0.66
SOX30O94993 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.2■□□□□ 0.66
SOX30O94993 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.2■□□□□ 0.66
SOX30O94993 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SOX30O94993 NTF6G-201ENST00000591094 616 ntBASIC19.2■□□□□ 0.66
SOX30O94993 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.2■□□□□ 0.66
SOX30O94993 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SOX30O94993 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SOX30O94993 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX30O94993 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX30O94993 AC116050.2-201ENST00000612102 1779 ntBASIC19.19■□□□□ 0.66
SOX30O94993 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX30O94993 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX30O94993 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX30O94993 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX30O94993 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.19■□□□□ 0.66
SOX30O94993 SLC7A5P2-201ENST00000553010 536 ntBASIC19.19■□□□□ 0.66
SOX30O94993 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX30O94993 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX30O94993 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.19■□□□□ 0.66
SOX30O94993 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX30O94993 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.19■□□□□ 0.66
SOX30O94993 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SOX30O94993 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.18■□□□□ 0.66
SOX30O94993 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SOX30O94993 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.18■□□□□ 0.66
SOX30O94993 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SOX30O94993 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.18■□□□□ 0.66
SOX30O94993 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX30O94993 PLK5-205ENST00000642079 1969 ntBASIC19.17■□□□□ 0.66
SOX30O94993 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SOX30O94993 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.17■□□□□ 0.66
SOX30O94993 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SOX30O94993 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX30O94993 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
SOX30O94993 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.16■□□□□ 0.66
SOX30O94993 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.16■□□□□ 0.66
SOX30O94993 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.16■□□□□ 0.66
SOX30O94993 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.16■□□□□ 0.66
SOX30O94993 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SOX30O94993 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SOX30O94993 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms