Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
LTN1O94822 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
LTN1O94822 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC27.7■■■□□ 2.03
LTN1O94822 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
LTN1O94822 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
LTN1O94822 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
LTN1O94822 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.02
LTN1O94822 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC27.7■■■□□ 2.02
LTN1O94822 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC27.7■■■□□ 2.02
LTN1O94822 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
LTN1O94822 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
LTN1O94822 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.7■■■□□ 2.02
LTN1O94822 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC27.7■■■□□ 2.02
LTN1O94822 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
LTN1O94822 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC27.69■■■□□ 2.02
LTN1O94822 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.69■■■□□ 2.02
LTN1O94822 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
LTN1O94822 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
LTN1O94822 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.02
LTN1O94822 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
LTN1O94822 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC27.68■■■□□ 2.02
LTN1O94822 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC27.68■■■□□ 2.02
LTN1O94822 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
LTN1O94822 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
LTN1O94822 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
LTN1O94822 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
LTN1O94822 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
LTN1O94822 MFF-205ENST00000354503 1085 ntTSL 2 BASIC27.68■■■□□ 2.02
LTN1O94822 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.02
LTN1O94822 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
LTN1O94822 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC27.68■■■□□ 2.02
LTN1O94822 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.68■■■□□ 2.02
LTN1O94822 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
LTN1O94822 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
LTN1O94822 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
LTN1O94822 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.67■■■□□ 2.02
LTN1O94822 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
LTN1O94822 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC27.67■■■□□ 2.02
LTN1O94822 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
LTN1O94822 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
LTN1O94822 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC27.67■■■□□ 2.02
LTN1O94822 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
LTN1O94822 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
LTN1O94822 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
LTN1O94822 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
LTN1O94822 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.67■■■□□ 2.02
LTN1O94822 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
LTN1O94822 ISG20-202ENST00000379224 540 ntTSL 3 BASIC27.66■■■□□ 2.02
LTN1O94822 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
LTN1O94822 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC27.66■■■□□ 2.02
LTN1O94822 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
LTN1O94822 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
LTN1O94822 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
LTN1O94822 EXOC3-AS1-202ENST00000623673 1663 ntBASIC27.66■■■□□ 2.02
LTN1O94822 AC242852.2-201ENST00000615738 1807 ntBASIC27.66■■■□□ 2.02
LTN1O94822 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC27.66■■■□□ 2.02
LTN1O94822 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
LTN1O94822 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC27.66■■■□□ 2.02
LTN1O94822 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC27.66■■■□□ 2.02
LTN1O94822 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC27.66■■■□□ 2.02
LTN1O94822 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC27.65■■■□□ 2.02
LTN1O94822 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC27.65■■■□□ 2.02
LTN1O94822 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC27.65■■■□□ 2.02
LTN1O94822 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
LTN1O94822 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC27.65■■■□□ 2.02
LTN1O94822 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LTN1O94822 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
LTN1O94822 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LTN1O94822 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC27.65■■■□□ 2.02
LTN1O94822 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LTN1O94822 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
LTN1O94822 REXO2-216ENST00000544196 452 ntTSL 3 BASIC27.65■■■□□ 2.02
LTN1O94822 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC27.65■■■□□ 2.02
LTN1O94822 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC27.65■■■□□ 2.02
LTN1O94822 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC27.65■■■□□ 2.02
LTN1O94822 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.65■■■□□ 2.02
LTN1O94822 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LTN1O94822 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LTN1O94822 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LTN1O94822 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC27.64■■■□□ 2.02
LTN1O94822 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC27.64■■■□□ 2.02
LTN1O94822 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LTN1O94822 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
LTN1O94822 SERP1-205ENST00000487153 657 ntTSL 4 BASIC27.64■■■□□ 2.02
LTN1O94822 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC27.64■■■□□ 2.02
LTN1O94822 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC27.64■■■□□ 2.01
LTN1O94822 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
LTN1O94822 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
LTN1O94822 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
LTN1O94822 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
LTN1O94822 MOK-233ENST00000524214 1539 ntTSL 2 BASIC27.63■■■□□ 2.01
LTN1O94822 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
LTN1O94822 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
LTN1O94822 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
LTN1O94822 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
LTN1O94822 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
LTN1O94822 MIR718-201ENST00000390190 70 ntBASIC27.63■■■□□ 2.01
LTN1O94822 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
LTN1O94822 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC27.62■■■□□ 2.01
LTN1O94822 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms