Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.68■□□□□ 0.58
ZIC3O60481 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.68■□□□□ 0.58
ZIC3O60481 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 AC010980.2-201ENST00000587099 1412 ntBASIC18.67■□□□□ 0.58
ZIC3O60481 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.67■□□□□ 0.58
ZIC3O60481 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ZIC3O60481 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ZIC3O60481 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZIC3O60481 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZIC3O60481 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 MKRN4P-201ENST00000444706 1521 ntBASIC18.66■□□□□ 0.58
ZIC3O60481 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.66■□□□□ 0.58
ZIC3O60481 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.66■□□□□ 0.58
ZIC3O60481 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.66■□□□□ 0.58
ZIC3O60481 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC3O60481 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 AC011484.1-201ENST00000377652 1995 ntBASIC18.65■□□□□ 0.58
ZIC3O60481 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 SLC29A4P1-201ENST00000398760 971 ntBASIC18.65■□□□□ 0.58
ZIC3O60481 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.65■□□□□ 0.58
ZIC3O60481 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.65■□□□□ 0.58
ZIC3O60481 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.65■□□□□ 0.58
ZIC3O60481 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.65■□□□□ 0.58
ZIC3O60481 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.65■□□□□ 0.58
ZIC3O60481 AC142086.2-201ENST00000569753 217 ntBASIC18.65■□□□□ 0.58
ZIC3O60481 AC100791.3-201ENST00000617619 330 ntBASIC18.65■□□□□ 0.58
ZIC3O60481 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.65■□□□□ 0.58
ZIC3O60481 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZIC3O60481 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC3O60481 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZIC3O60481 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.64■□□□□ 0.58
ZIC3O60481 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZIC3O60481 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ZIC3O60481 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC3O60481 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC3O60481 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.64■□□□□ 0.57
ZIC3O60481 MIPEPP3-201ENST00000412105 444 ntBASIC18.64■□□□□ 0.57
ZIC3O60481 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.64■□□□□ 0.57
ZIC3O60481 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.64■□□□□ 0.57
ZIC3O60481 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.64■□□□□ 0.57
ZIC3O60481 AL138781.1-201ENST00000566567 1274 ntBASIC18.64■□□□□ 0.57
ZIC3O60481 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.64■□□□□ 0.57
ZIC3O60481 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.64■□□□□ 0.57
ZIC3O60481 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC3O60481 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC3O60481 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.64■□□□□ 0.57
ZIC3O60481 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.63■□□□□ 0.57
ZIC3O60481 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZIC3O60481 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.63■□□□□ 0.57
ZIC3O60481 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.63■□□□□ 0.57
ZIC3O60481 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.63■□□□□ 0.57
ZIC3O60481 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.63■□□□□ 0.57
ZIC3O60481 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.63■□□□□ 0.57
ZIC3O60481 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ZIC3O60481 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZIC3O60481 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.63■□□□□ 0.57
ZIC3O60481 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZIC3O60481 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ZIC3O60481 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC3O60481 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZIC3O60481 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.62■□□□□ 0.57
ZIC3O60481 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC3O60481 AL355802.2-201ENST00000402069 882 ntBASIC18.62■□□□□ 0.57
ZIC3O60481 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.62■□□□□ 0.57
ZIC3O60481 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.62■□□□□ 0.57
ZIC3O60481 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.62■□□□□ 0.57
ZIC3O60481 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC3O60481 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.62■□□□□ 0.57
ZIC3O60481 AC121338.2-201ENST00000622535 1744 ntBASIC18.62■□□□□ 0.57
ZIC3O60481 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms