Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX1O43933 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX1O43933 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.06■□□□□ 0.8
PEX1O43933 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX1O43933 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
PEX1O43933 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PEX1O43933 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PEX1O43933 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PEX1O43933 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX1O43933 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.05■□□□□ 0.8
PEX1O43933 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX1O43933 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX1O43933 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PEX1O43933 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.05■□□□□ 0.8
PEX1O43933 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX1O43933 AC068587.7-201ENST00000641602 218 ntBASIC20.05■□□□□ 0.8
PEX1O43933 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.05■□□□□ 0.8
PEX1O43933 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX1O43933 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX1O43933 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX1O43933 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.05■□□□□ 0.8
PEX1O43933 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX1O43933 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX1O43933 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PEX1O43933 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
PEX1O43933 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PEX1O43933 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
PEX1O43933 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.04■□□□□ 0.8
PEX1O43933 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PEX1O43933 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.04■□□□□ 0.8
PEX1O43933 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.04■□□□□ 0.8
PEX1O43933 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.04■□□□□ 0.8
PEX1O43933 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.04■□□□□ 0.8
PEX1O43933 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.04■□□□□ 0.8
PEX1O43933 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 AL031602.1-201ENST00000633169 911 ntBASIC20.04■□□□□ 0.8
PEX1O43933 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.04■□□□□ 0.8
PEX1O43933 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.04■□□□□ 0.8
PEX1O43933 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PEX1O43933 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
PEX1O43933 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX1O43933 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.03■□□□□ 0.8
PEX1O43933 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.03■□□□□ 0.8
PEX1O43933 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX1O43933 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PEX1O43933 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PEX1O43933 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.03■□□□□ 0.8
PEX1O43933 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.03■□□□□ 0.8
PEX1O43933 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PEX1O43933 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.03■□□□□ 0.8
PEX1O43933 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PEX1O43933 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.03■□□□□ 0.8
PEX1O43933 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX1O43933 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX1O43933 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PEX1O43933 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.03■□□□□ 0.8
PEX1O43933 PCDHAC2-203ENST00000615316 3011 ntBASIC20.02■□□□□ 0.8
PEX1O43933 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.02■□□□□ 0.8
PEX1O43933 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.02■□□□□ 0.8
PEX1O43933 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 AC073314.1-201ENST00000568729 2216 ntBASIC20.02■□□□□ 0.8
PEX1O43933 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.02■□□□□ 0.8
PEX1O43933 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.02■□□□□ 0.8
PEX1O43933 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.02■□□□□ 0.8
PEX1O43933 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.02■□□□□ 0.8
PEX1O43933 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.02■□□□□ 0.8
PEX1O43933 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PEX1O43933 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.02■□□□□ 0.8
PEX1O43933 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX1O43933 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.02■□□□□ 0.79
PEX1O43933 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PEX1O43933 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
PEX1O43933 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.02■□□□□ 0.79
PEX1O43933 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PEX1O43933 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX1O43933 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PEX1O43933 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PEX1O43933 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PEX1O43933 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX1O43933 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX1O43933 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms