Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.91■□□□□ 0.78
PRICKLE3O43900 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE3O43900 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRICKLE3O43900 AC011484.1-201ENST00000377652 1995 ntBASIC19.9■□□□□ 0.78
PRICKLE3O43900 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRICKLE3O43900 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRICKLE3O43900 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRICKLE3O43900 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRICKLE3O43900 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRICKLE3O43900 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.9■□□□□ 0.78
PRICKLE3O43900 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRICKLE3O43900 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRICKLE3O43900 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRICKLE3O43900 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRICKLE3O43900 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRICKLE3O43900 AL512625.2-201ENST00000417533 625 ntBASIC19.89■□□□□ 0.77
PRICKLE3O43900 AC083906.2-201ENST00000511578 360 ntBASIC19.89■□□□□ 0.77
PRICKLE3O43900 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.89■□□□□ 0.77
PRICKLE3O43900 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.89■□□□□ 0.77
PRICKLE3O43900 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PRICKLE3O43900 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
PRICKLE3O43900 AC005229.4-201ENST00000610085 2198 ntBASIC19.89■□□□□ 0.77
PRICKLE3O43900 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.89■□□□□ 0.77
PRICKLE3O43900 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRICKLE3O43900 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.89■□□□□ 0.77
PRICKLE3O43900 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PRICKLE3O43900 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRICKLE3O43900 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRICKLE3O43900 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRICKLE3O43900 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRICKLE3O43900 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 AC069236.1-201ENST00000604339 616 ntBASIC19.88■□□□□ 0.77
PRICKLE3O43900 AL121832.2-201ENST00000610979 668 ntBASIC19.88■□□□□ 0.77
PRICKLE3O43900 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRICKLE3O43900 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRICKLE3O43900 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRICKLE3O43900 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRICKLE3O43900 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PRICKLE3O43900 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRICKLE3O43900 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRICKLE3O43900 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRICKLE3O43900 GUSBP6-202ENST00000438529 1198 ntBASIC19.87■□□□□ 0.77
PRICKLE3O43900 AC093787.1-201ENST00000450396 207 ntBASIC19.87■□□□□ 0.77
PRICKLE3O43900 AF201337.1-201ENST00000520239 748 ntBASIC19.87■□□□□ 0.77
PRICKLE3O43900 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRICKLE3O43900 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRICKLE3O43900 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRICKLE3O43900 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRICKLE3O43900 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRICKLE3O43900 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRICKLE3O43900 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRICKLE3O43900 AC121338.2-201ENST00000622535 1744 ntBASIC19.86■□□□□ 0.77
PRICKLE3O43900 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRICKLE3O43900 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRICKLE3O43900 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.86■□□□□ 0.77
PRICKLE3O43900 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRICKLE3O43900 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRICKLE3O43900 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PRICKLE3O43900 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRICKLE3O43900 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRICKLE3O43900 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRICKLE3O43900 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRICKLE3O43900 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PRICKLE3O43900 ID1-201ENST00000376105 1233 ntBASIC19.85■□□□□ 0.77
PRICKLE3O43900 GPX1P1-201ENST00000388829 606 ntBASIC19.85■□□□□ 0.77
PRICKLE3O43900 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.85■□□□□ 0.77
PRICKLE3O43900 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.85■□□□□ 0.77
PRICKLE3O43900 AC105036.2-201ENST00000569468 176 ntBASIC19.85■□□□□ 0.77
PRICKLE3O43900 AC100791.3-201ENST00000617619 330 ntBASIC19.85■□□□□ 0.77
PRICKLE3O43900 AC008694.1-202ENST00000636953 945 ntBASIC19.85■□□□□ 0.77
PRICKLE3O43900 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRICKLE3O43900 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PRICKLE3O43900 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRICKLE3O43900 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRICKLE3O43900 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms