Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.69■□□□□ 0.9
TSPAN6O43657 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TSPAN6O43657 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.69■□□□□ 0.9
TSPAN6O43657 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN6O43657 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN6O43657 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.68■□□□□ 0.9
TSPAN6O43657 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TSPAN6O43657 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TSPAN6O43657 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN6O43657 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.68■□□□□ 0.9
TSPAN6O43657 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.68■□□□□ 0.9
TSPAN6O43657 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN6O43657 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.68■□□□□ 0.9
TSPAN6O43657 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN6O43657 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN6O43657 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN6O43657 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TSPAN6O43657 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN6O43657 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TSPAN6O43657 AC116050.2-201ENST00000612102 1779 ntBASIC20.67■□□□□ 0.9
TSPAN6O43657 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 LSM12P1-201ENST00000411836 588 ntBASIC20.67■□□□□ 0.9
TSPAN6O43657 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.67■□□□□ 0.9
TSPAN6O43657 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TSPAN6O43657 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TSPAN6O43657 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TSPAN6O43657 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TSPAN6O43657 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TSPAN6O43657 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.67■□□□□ 0.9
TSPAN6O43657 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.67■□□□□ 0.9
TSPAN6O43657 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN6O43657 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN6O43657 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TSPAN6O43657 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN6O43657 MCRIP2P1-201ENST00000394346 511 ntBASIC20.66■□□□□ 0.9
TSPAN6O43657 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.66■□□□□ 0.9
TSPAN6O43657 AC097658.1-201ENST00000475555 843 ntBASIC20.66■□□□□ 0.9
TSPAN6O43657 CYP2T3P-201ENST00000601990 817 ntBASIC20.66■□□□□ 0.9
TSPAN6O43657 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.66■□□□□ 0.9
TSPAN6O43657 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TSPAN6O43657 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN6O43657 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN6O43657 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TSPAN6O43657 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.66■□□□□ 0.9
TSPAN6O43657 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN6O43657 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.66■□□□□ 0.9
TSPAN6O43657 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.66■□□□□ 0.9
TSPAN6O43657 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN6O43657 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN6O43657 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TSPAN6O43657 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TSPAN6O43657 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TSPAN6O43657 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN6O43657 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN6O43657 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TSPAN6O43657 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN6O43657 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN6O43657 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.65■□□□□ 0.9
TSPAN6O43657 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.65■□□□□ 0.9
TSPAN6O43657 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN6O43657 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN6O43657 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TSPAN6O43657 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TSPAN6O43657 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.64■□□□□ 0.89
TSPAN6O43657 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN6O43657 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN6O43657 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.64■□□□□ 0.89
TSPAN6O43657 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.64■□□□□ 0.89
TSPAN6O43657 AC091874.3-201ENST00000512672 1195 ntBASIC20.64■□□□□ 0.89
TSPAN6O43657 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.64■□□□□ 0.89
TSPAN6O43657 MYC-209ENST00000641252 345 ntBASIC20.64■□□□□ 0.89
TSPAN6O43657 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN6O43657 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN6O43657 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN6O43657 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN6O43657 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TSPAN6O43657 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN6O43657 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.63■□□□□ 0.89
TSPAN6O43657 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN6O43657 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms