Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
KCNN4O15554 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 AC011484.1-201ENST00000377652 1995 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 KRT16P2-201ENST00000414673 1423 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.23■□□□□ 0.99
KCNN4O15554 DUX4L2-201ENST00000561772 1275 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.23■□□□□ 0.99
KCNN4O15554 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.23■□□□□ 0.99
KCNN4O15554 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.23■□□□□ 0.99
KCNN4O15554 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
KCNN4O15554 AC120498.10-201ENST00000621827 505 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 DUX4L6-201ENST00000626483 1275 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 DUX4L1-201ENST00000627662 1275 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 DUX4L8-201ENST00000629013 1275 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 DUX4L3-201ENST00000630187 1275 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 DUX4L7-201ENST00000630678 1275 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 DUX4L5-201ENST00000630834 1275 ntBASIC21.23■□□□□ 0.99
KCNN4O15554 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.23■□□□□ 0.99
KCNN4O15554 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
KCNN4O15554 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNN4O15554 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.22■□□□□ 0.99
KCNN4O15554 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNN4O15554 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KCNN4O15554 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNN4O15554 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNN4O15554 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KCNN4O15554 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.22■□□□□ 0.99
KCNN4O15554 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.22■□□□□ 0.99
KCNN4O15554 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.22■□□□□ 0.99
KCNN4O15554 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KCNN4O15554 KRT18P14-201ENST00000534205 1250 ntBASIC21.22■□□□□ 0.99
KCNN4O15554 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.22■□□□□ 0.99
KCNN4O15554 AP001160.3-201ENST00000601484 763 ntBASIC21.22■□□□□ 0.99
KCNN4O15554 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.22■□□□□ 0.99
KCNN4O15554 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNN4O15554 RARRES2P11-201ENST00000635158 484 ntBASIC21.22■□□□□ 0.99
KCNN4O15554 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNN4O15554 AP005212.1-201ENST00000581547 1997 ntBASIC21.22■□□□□ 0.99
KCNN4O15554 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNN4O15554 FP700111.2-201ENST00000619190 1892 ntBASIC21.22■□□□□ 0.99
KCNN4O15554 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KCNN4O15554 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
KCNN4O15554 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNN4O15554 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNN4O15554 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KCNN4O15554 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNN4O15554 SLC7A5P2-201ENST00000553010 536 ntBASIC21.21■□□□□ 0.99
KCNN4O15554 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.21■□□□□ 0.99
KCNN4O15554 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KCNN4O15554 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNN4O15554 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNN4O15554 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
KCNN4O15554 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.2■□□□□ 0.99
KCNN4O15554 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
KCNN4O15554 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.99
KCNN4O15554 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNN4O15554 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNN4O15554 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.2■□□□□ 0.98
KCNN4O15554 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.2■□□□□ 0.98
KCNN4O15554 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.2■□□□□ 0.98
KCNN4O15554 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
KCNN4O15554 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNN4O15554 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KCNN4O15554 GABARAPL3-202ENST00000624044 1851 ntBASIC21.2■□□□□ 0.98
KCNN4O15554 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KCNN4O15554 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
KCNN4O15554 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNN4O15554 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNN4O15554 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.19■□□□□ 0.98
KCNN4O15554 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
KCNN4O15554 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms