Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFRD1O00458 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFRD1O00458 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFRD1O00458 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFRD1O00458 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFRD1O00458 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFRD1O00458 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
IFRD1O00458 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
IFRD1O00458 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.4■□□□□ 0.86
IFRD1O00458 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.4■□□□□ 0.86
IFRD1O00458 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.4■□□□□ 0.86
IFRD1O00458 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFRD1O00458 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.4■□□□□ 0.86
IFRD1O00458 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.4■□□□□ 0.86
IFRD1O00458 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.4■□□□□ 0.86
IFRD1O00458 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFRD1O00458 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
IFRD1O00458 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.4■□□□□ 0.86
IFRD1O00458 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.4■□□□□ 0.86
IFRD1O00458 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.39■□□□□ 0.86
IFRD1O00458 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
IFRD1O00458 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.39■□□□□ 0.86
IFRD1O00458 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IFRD1O00458 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFRD1O00458 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFRD1O00458 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.39■□□□□ 0.85
IFRD1O00458 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.39■□□□□ 0.85
IFRD1O00458 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.39■□□□□ 0.85
IFRD1O00458 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IFRD1O00458 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IFRD1O00458 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFRD1O00458 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
IFRD1O00458 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFRD1O00458 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
IFRD1O00458 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFRD1O00458 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
IFRD1O00458 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.38■□□□□ 0.85
IFRD1O00458 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.38■□□□□ 0.85
IFRD1O00458 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 TERF1P5-201ENST00000477545 1207 ntBASIC20.38■□□□□ 0.85
IFRD1O00458 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.38■□□□□ 0.85
IFRD1O00458 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.38■□□□□ 0.85
IFRD1O00458 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
IFRD1O00458 AC231657.2-201ENST00000624556 255 ntBASIC20.38■□□□□ 0.85
IFRD1O00458 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.38■□□□□ 0.85
IFRD1O00458 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.38■□□□□ 0.85
IFRD1O00458 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
IFRD1O00458 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFRD1O00458 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
IFRD1O00458 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.37■□□□□ 0.85
IFRD1O00458 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.37■□□□□ 0.85
IFRD1O00458 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.37■□□□□ 0.85
IFRD1O00458 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.37■□□□□ 0.85
IFRD1O00458 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFRD1O00458 AC013268.1-206ENST00000638368 961 ntBASIC20.37■□□□□ 0.85
IFRD1O00458 AC112229.1-201ENST00000639295 961 ntBASIC20.37■□□□□ 0.85
IFRD1O00458 AC073111.5-205ENST00000641717 521 ntBASIC20.37■□□□□ 0.85
IFRD1O00458 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFRD1O00458 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFRD1O00458 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.37■□□□□ 0.85
IFRD1O00458 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFRD1O00458 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFRD1O00458 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.37■□□□□ 0.85
IFRD1O00458 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFRD1O00458 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
IFRD1O00458 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.36■□□□□ 0.85
IFRD1O00458 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.36■□□□□ 0.85
IFRD1O00458 DUX4L16-201ENST00000555130 1264 ntBASIC20.36■□□□□ 0.85
IFRD1O00458 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.36■□□□□ 0.85
IFRD1O00458 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.36■□□□□ 0.85
IFRD1O00458 AC243732.1-201ENST00000612648 864 ntBASIC20.36■□□□□ 0.85
IFRD1O00458 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
IFRD1O00458 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.36■□□□□ 0.85
IFRD1O00458 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.36■□□□□ 0.85
IFRD1O00458 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFRD1O00458 RBM17P2-201ENST00000616397 1405 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms