Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB4C9JG80 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.33■□□□□ 0.53
NPIPB4C9JG80 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 UBE2DNL-204ENST00000602536 740 ntBASIC18.33■□□□□ 0.52
NPIPB4C9JG80 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.33■□□□□ 0.52
NPIPB4C9JG80 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 AC007322.3-201ENST00000426526 701 ntBASIC18.32■□□□□ 0.52
NPIPB4C9JG80 KRT18P11-201ENST00000435214 1283 ntBASIC18.32■□□□□ 0.52
NPIPB4C9JG80 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPB4C9JG80 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPB4C9JG80 FP700111.2-201ENST00000619190 1892 ntBASIC18.31■□□□□ 0.52
NPIPB4C9JG80 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 AC073314.1-201ENST00000568729 2216 ntBASIC18.3■□□□□ 0.52
NPIPB4C9JG80 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 AC020907.5-201ENST00000624372 1936 ntBASIC18.3■□□□□ 0.52
NPIPB4C9JG80 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 AC087623.3-201ENST00000607047 1098 ntBASIC18.3■□□□□ 0.52
NPIPB4C9JG80 MIR2861-201ENST00000636310 90 ntBASIC18.3■□□□□ 0.52
NPIPB4C9JG80 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 AL157384.1-201ENST00000445995 2473 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms