Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 KRT87P-202ENST00000534226 1464 ntBASIC22.29■■□□□ 1.16
LRRC53A6NM62 PCDHAC2-203ENST00000615316 3011 ntBASIC22.29■■□□□ 1.16
LRRC53A6NM62 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.29■■□□□ 1.16
LRRC53A6NM62 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.29■■□□□ 1.16
LRRC53A6NM62 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.29■■□□□ 1.16
LRRC53A6NM62 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
LRRC53A6NM62 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.29■■□□□ 1.16
LRRC53A6NM62 AC142381.2-201ENST00000566120 298 ntBASIC22.29■■□□□ 1.16
LRRC53A6NM62 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.29■■□□□ 1.16
LRRC53A6NM62 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC53A6NM62 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRC53A6NM62 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRC53A6NM62 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRC53A6NM62 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRC53A6NM62 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRC53A6NM62 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
LRRC53A6NM62 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRC53A6NM62 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC53A6NM62 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 AC008175.2-201ENST00000612840 297 ntBASIC22.27■■□□□ 1.16
LRRC53A6NM62 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC53A6NM62 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.27■■□□□ 1.16
LRRC53A6NM62 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
LRRC53A6NM62 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC53A6NM62 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC53A6NM62 AL512408.1-201ENST00000569378 2000 ntBASIC22.26■■□□□ 1.15
LRRC53A6NM62 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC53A6NM62 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC53A6NM62 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC53A6NM62 POU5F1P4-201ENST00000413175 1085 ntBASIC22.26■■□□□ 1.15
LRRC53A6NM62 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC53A6NM62 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC53A6NM62 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRC53A6NM62 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC53A6NM62 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC53A6NM62 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC53A6NM62 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC53A6NM62 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC53A6NM62 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC53A6NM62 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC53A6NM62 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC53A6NM62 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRRC53A6NM62 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
LRRC53A6NM62 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC53A6NM62 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC53A6NM62 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRC53A6NM62 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.24■■□□□ 1.15
LRRC53A6NM62 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms