Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.07
LINC01546A6NGU7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.64□□□□□ -0.07
LINC01546A6NGU7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01546A6NGU7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 TMEM179-206ENST00000616017 1645 ntBASIC14.63□□□□□ -0.07
LINC01546A6NGU7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.63□□□□□ -0.07
LINC01546A6NGU7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 AC093503.3-201ENST00000624917 2352 ntBASIC14.63□□□□□ -0.07
LINC01546A6NGU7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01546A6NGU7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC01546A6NGU7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 AC093484.2-201ENST00000580996 2166 ntBASIC14.61□□□□□ -0.07
LINC01546A6NGU7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 AC026471.1-201ENST00000564629 3026 ntBASIC14.61□□□□□ -0.07
LINC01546A6NGU7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 Z82202.1-201ENST00000623446 1880 ntBASIC14.61□□□□□ -0.07
LINC01546A6NGU7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms