Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 SMUG1P1-201ENST00000590640 811 ntBASIC17.62■□□□□ 0.41
TMEM235A6NFC5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM235A6NFC5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.61■□□□□ 0.41
TMEM235A6NFC5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM235A6NFC5 AC099778.1-201ENST00000568593 1911 ntBASIC17.6■□□□□ 0.41
TMEM235A6NFC5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM235A6NFC5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 AC011298.3-201ENST00000615796 283 ntBASIC17.59■□□□□ 0.41
TMEM235A6NFC5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TMEM235A6NFC5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM235A6NFC5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM235A6NFC5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM235A6NFC5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM235A6NFC5 AC087289.5-201ENST00000586076 3175 ntBASIC17.58■□□□□ 0.4
TMEM235A6NFC5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 DUX4L19-201ENST00000557448 1267 ntBASIC17.58■□□□□ 0.4
TMEM235A6NFC5 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.58■□□□□ 0.4
TMEM235A6NFC5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM235A6NFC5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms