Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MEIS3P1A6NDR6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 UNC93B8-201ENST00000511903 705 ntBASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MEIS3P1A6NDR6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MEIS3P1A6NDR6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 AC099778.1-201ENST00000568593 1911 ntBASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 AL020996.1-203ENST00000536896 2307 ntBASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MEIS3P1A6NDR6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MEIS3P1A6NDR6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MEIS3P1A6NDR6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms