Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TRIM49BA6NDI0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 KRT18P14-201ENST00000534205 1250 ntBASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 AC004854.2-201ENST00000608450 1441 ntBASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.79■■□□□ 1.24
TRIM49BA6NDI0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 KRT18P61-201ENST00000585825 1298 ntBASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM49BA6NDI0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 KRT16P2-201ENST00000414673 1423 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 DUX4L2-201ENST00000561772 1275 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 AP001160.3-201ENST00000601484 763 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 DUX4L6-201ENST00000626483 1275 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 DUX4L1-201ENST00000627662 1275 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 DUX4L8-201ENST00000629013 1275 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 DUX4L3-201ENST00000630187 1275 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 DUX4L7-201ENST00000630678 1275 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 DUX4L5-201ENST00000630834 1275 ntBASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM49BA6NDI0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.77■■□□□ 1.23
TRIM49BA6NDI0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
TRIM49BA6NDI0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.23
TRIM49BA6NDI0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
TRIM49BA6NDI0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM49BA6NDI0 AL121603.2-201ENST00000557373 2117 ntBASIC22.75■■□□□ 1.23
TRIM49BA6NDI0 PCDHAC2-203ENST00000615316 3011 ntBASIC22.75■■□□□ 1.23
TRIM49BA6NDI0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
TRIM49BA6NDI0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM49BA6NDI0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM49BA6NDI0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.75■■□□□ 1.23
TRIM49BA6NDI0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.75■■□□□ 1.23
TRIM49BA6NDI0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms